Pairwise Alignments

Query, 884 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 848 a.a., FIG100795: Fimbriae usher protein StiC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  594 bits (1531), Expect = e-174
 Identities = 335/838 (39%), Positives = 501/838 (59%), Gaps = 52/838 (6%)

Query: 52  LAFSAETFNPEMLKSIGDGGDLQGVNLDYFAEKGGQMPGTYQVDVYLNNQQVDSRNVEF- 110
           +A++ + FNP  +++ G   +   V+L  F     Q+PGTY V + +N  ++ +RNV+F 
Sbjct: 27  VAWARDYFNPAFIENHGQA-NRTSVDLSTFDNDKSQLPGTYYVTININKTEIGARNVDFQ 85

Query: 111 -VSLPDAPGKLYGAITPAEMADYGVKLDVFPDLKAVAPDAKLTRPLSAYVPQATENLDLN 169
             +L D    L G +   E+ D GVK D+FP L++      L+      +P A++  D  
Sbjct: 86  LATLSDGQQALQGCLRLQELKDNGVKTDLFPTLESEKGCVDLS-----VIPGASQRFDFQ 140

Query: 170 RKRYDITVPQIGVNVRPRNSVDPKRWDNGIPAFMLNYSYSGSTT--QRDNSGQSQSNFVN 227
           ++   +++PQ+ +    R  V P++W  GI A MLNYS+SG       ++S  ++S ++ 
Sbjct: 141 QQALSVSIPQLYIANNARGYVPPEKWQEGITALMLNYSFSGYKEYGSSEDSDDAESKYLA 200

Query: 228 LRSGANLGAWRLRNYSTYNNQQNEGSHGGDDTNTSNFESINTYVQRDVRFLQGGQLTLGE 287
           L+ G NLG WR RNYS +++  N G +G       ++ S+  Y+QRD+  L+  Q T G+
Sbjct: 201 LQPGFNLGPWRFRNYSNWSS--NNGENG-------SWNSVYNYLQRDIIALKS-QFTAGD 250

Query: 288 YSTPADVFDSIQFTGAQLASDDQMLPDSMSQFAPTVRGIAKSNAQVTIKQNGYVIYQSNV 347
            +TP+DVFDS+ F G QL SDDQM P+S   +APT+RGIA+SNAQV ++QNGY+ YQ+ V
Sbjct: 251 SNTPSDVFDSVPFRGLQLTSDDQMQPNSQRGYAPTIRGIARSNAQVIVRQNGYIAYQTAV 310

Query: 348 SPGPFAITDLYPSGNGGDMEVTVTESDGSATKFNIATSSVPILQREGRFKYNMALGKYRT 407
           SPG F I D++P+G+ GD +VTV E+DGS   F +  SS+PILQR GR KY++ +GKYR 
Sbjct: 311 SPGEFEINDMFPTGSNGDYDVTVKEADGSEQHFIVPYSSLPILQRTGRAKYSVTVGKYRD 370

Query: 408 GNDDTETPNFIQLSNIYGLTARTTVYGGVQYA-ENYRAANVGVGFDLGSAGAVSFDATQA 466
            N+     +F Q + +YGL    T+YGG Q A + Y++   GVG ++   GA+S D   +
Sbjct: 371 YNNHA-LDDFGQATLLYGLPWGITLYGGSQIAGDKYQSVAFGVGQNMQMLGAISLDGIWS 429

Query: 467 TSEFEDSTDTQKGQSYRAMYAKNFEATDTNLQIAGYRYSTEGYYAFSDVQDYQKETDSDF 526
            ++F+D    + GQS+   Y+K   +T T   +AGYRY++E Y + S+V +     D  +
Sbjct: 430 HAKFDDGR-KEIGQSWHVRYSKGVVSTGTTFSLAGYRYASENYNSLSEVIN---PDDDFY 485

Query: 527 DNYNRSHNQRSKMQLSVNQSIGD-YGSIYVSGSQQDYWGGDGKEQLLQLGYNTSIYGISY 585
           DNY + HN   + + SVNQ I +  GS+ +S  ++DYW    + + L   YN S   +SY
Sbjct: 486 DNYGKRHN---RFEASVNQQISNTLGSLTLSWVKEDYWHSAQQMESLSASYNNSWGPVSY 542

Query: 586 GFNYNYSKN---------------PGMTEADQVFAFNMSVPLDRFIGSSGASATYNMSSK 630
             +Y+Y+KN                   + D++F  ++ VP   F   S   A+Y ++++
Sbjct: 543 TLSYSYNKNTYQYRSDNDDDDNDDDRYNQNDRLFTLSLHVPFTVF--DSRLYASYMLNTR 600

Query: 631 KHGSTVQQAGVSGTLLQGDNLSYSVQQGYENQGNGASGNASMDYKGGSGEGNLGYSYDQE 690
           KH +TV    +SGT L+  NL++S+QQ +  Q +G SG  +  YKG     N GY+   +
Sbjct: 601 KHDATVNSTTLSGTALRDRNLNWSLQQSHSTQ-DGDSGGVNASYKGTYANLNAGYNQSPD 659

Query: 691 SRQWSYGIQGGILLHENGITLSQPLGDTVTLVKAPGADDVNVENNSGVHTDWRGYAVVPY 750
           S+Q SYGI GGIL HENGITLSQP+     L+KAPGA  V+VEN +GV TD+RGY V+P 
Sbjct: 660 SQQVSYGISGGILAHENGITLSQPITGAAILIKAPGASGVSVENQTGVATDFRGYTVIPN 719

Query: 751 AQPYRKNSVTLETESFADDVDMDMNTQTVIPTRGAVVRAEFKTRVGQRALVQLL-FMGKP 809
             PY +  ++L++ +FAD+VD+ +N QTV PTR AVVRA + T  G R L+ L    G+P
Sbjct: 720 VTPYYRYDISLDSSTFADNVDIPLNNQTVYPTRNAVVRAAYDTHKGYRVLLTLTRSNGEP 779

Query: 810 VPFGATVSLLDNDSTVTGIVSDNGEVYLTGLPETGNIMAKWGNGSNEQCKGAYSLTSS 867
           VPFGAT S+   D+ +  IV D G+V+L+GLPE G ++  WG+ S   C+  Y L  S
Sbjct: 780 VPFGATASVDGQDANLASIVGDKGQVFLSGLPEEGLLLVNWGSAS---CRADYRLDIS 834