Pairwise Alignments

Query, 884 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 840 a.a., fimbrial protein from Escherichia coli ECRC62

 Score =  599 bits (1544), Expect = e-175
 Identities = 334/854 (39%), Positives = 509/854 (59%), Gaps = 44/854 (5%)

Query: 46  LLSLPGLAFSAETFNPEMLKSIGDGGDLQGVNLDYFAEKGGQMPGTYQVDVYLNNQQVDS 105
           L+    L      FNP +L+         GV++  F       PG Y VD+++N +  + 
Sbjct: 16  LIFSQNLMAEVSVFNPALLEI----DHQSGVDIRQFNRANLMPPGVYSVDIFINGKMFER 71

Query: 106 RNVEFVS-LPDAPGKLYGAITPAEMADYGVKLDVFPDLKAVAPDAKLTRPLSAYVPQATE 164
           ++V FV   PDA            ++ +G+K+D       V  D  +    +  +  ++ 
Sbjct: 72  QDVTFVQDNPDADLHACFIAIKKTLSSFGIKVDALKSFNDV--DETVCLDPAPRIEGSSW 129

Query: 165 NLDLNRKRYDITVPQIGVNVRPRNSVDPKRWDNGIPAFMLNYSYSGSTTQRDNSG--QSQ 222
             D ++ + +I++PQI ++    + + P RWD GI A  +NY +SGS T R + G  ++ 
Sbjct: 130 QFDSDKLQLNISIPQIYMDAMAYDYISPTRWDEGINALTINYDFSGSHTLRSDYGSQETD 189

Query: 223 SNFVNLRSGANLGAWRLRNYSTYNNQQNEGSHGGDDTNTSNFESINTYVQRDVRFLQGGQ 282
           ++++NLR+G N+G WRLRNYST N               + + SI+T++QRD+  L+  Q
Sbjct: 190 TSYLNLRNGLNIGPWRLRNYSTLNTSDGR----------AEYNSISTWIQRDIAALRS-Q 238

Query: 283 LTLGEYSTPADVFDSIQFTGAQLASDDQMLPDSMSQFAPTVRGIAKSNAQVTIKQNGYVI 342
           + +G+  T +D+FDS Q  GA+L +D+ MLP S + FAP VRGIAKSNA V I+QNGYVI
Sbjct: 239 IMIGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVI 298

Query: 343 YQSNVSPGPFAITDLYPSGNGGDMEVTVTESDGSATKFNIATSSVPILQREGRFKYNMAL 402
           YQS VS G F ITDL  +  GGD++VT+ E DGS  +F    +S+ IL+REG+   ++++
Sbjct: 299 YQSAVSQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGQTDVDVSV 358

Query: 403 GKYRTGNDDTETPNFIQLSNIYGLTARTTVYGGVQYAENYRAANVGVGFDLGSAGAVSFD 462
           G+ R  ++D  TP+ +Q   ++G +   T+YGG+Q AENY +A +GVG DLG+ GA+SFD
Sbjct: 359 GELR--DEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFD 416

Query: 463 ATQATSEFEDSTDTQKGQSYRAMYAKNFEATDTNLQIAGYRYSTEGYYAFSDVQDYQKET 522
            T A + F    DT+ GQSYR +Y+K F+ TDT+L++ GYRYSTEGYY  ++    +   
Sbjct: 417 VTHARANFSHD-DTETGQSYRFLYSKRFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSP 475

Query: 523 DSDFDNYNRSHNQRSKMQLSVNQSIG-DYGSIYVSGSQQDYWGGDGKEQLLQLGYNTSIY 581
           +  ++  NR    RS+++ ++ QS+G DYG++Y++ S+Q YW  D  E+L+Q GY++S  
Sbjct: 476 EDFWETGNR----RSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWK 531

Query: 582 GISYGFNYNYSKNPGM---------TEADQVFAFNMSVPLDRFIGSSGASATYNMSSKKH 632
            +S+  +++YS                ++Q++  ++SVPL  + G+S   ATY++S   +
Sbjct: 532 RLSWNVSWSYSNTARQGTGNNHASDNTSEQIYMLSLSVPLSGWWGNS--YATYSVSQNDN 589

Query: 633 GSTVQQAGVSGTLLQGDNLSYSVQQGYENQGNGASGNASMDYKGGSGEGNLGYSYDQESR 692
             +  Q G+SGT L+ +NLS+++ Q Y +  +   GN S+ Y G  G  N  Y+Y Q S+
Sbjct: 590 SGSSHQLGLSGTALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNGSYNYSQNSQ 649

Query: 693 QWSYGIQGGILLHENGITLSQPLGDTVTLVKAPGADDVNVENNSGVHTDWRGYAVVPYAQ 752
           + +YGI+GGIL H  G+TLSQ LG+T+ LVKAPGA  + ++N  G  TDWRGY V     
Sbjct: 650 RLNYGIRGGILAHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLN 709

Query: 753 PYRKNSVTLETESFA-DDVDMDMNTQTVIPTRGAVVRAEFKTRVGQRALVQLL-FMGKPV 810
           PY +N V +    F+  ++++D    T++PTRGAVV+AEF T VG R L ++L   GKPV
Sbjct: 710 PYDENRVAISDNYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPV 769

Query: 811 PFGATVSLLDNDSTVTGIVSDNGEVYLTGLPETGNIMAKWGNGSNEQCKGAYSLTSSNAS 870
           PFGA  ++ D     +GIV D GE+YL+GLPE G +   WG  ++ +C   YSL  S   
Sbjct: 770 PFGAIAAIQDASLADSGIVGDRGELYLSGLPEKGQVTLSWGENASTKCIFNYSL--STPE 827

Query: 871 DPSALIKQITAQCH 884
             S LI+Q    CH
Sbjct: 828 SESGLIEQ-GVTCH 840