Pairwise Alignments

Query, 884 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 485 a.a., putative outer membrane usher protein LpfC' from Escherichia coli ECRC100

 Score =  474 bits (1221), Expect = e-138
 Identities = 231/481 (48%), Positives = 332/481 (69%), Gaps = 14/481 (2%)

Query: 387 VPILQREGRFKYNMALGKYRTGNDDTETPNFIQLSNIYGLTARTTVYGGVQYAENYRAAN 446
           VPI QREG  KY+ A G+Y+ GN D+ +P F QL  IYGL    T YGGV  + NY A  
Sbjct: 1   VPIFQREGHLKYSFAAGEYQAGNYDSASPRFGQLDLIYGLPWGMTAYGGVLISNNYNAFT 60

Query: 447 VGVGFDLGSAGAVSFDATQATSEFEDSTDTQKGQSYRAMYAKNFEATDTNLQIAGYRYST 506
           +G+G + G  GA+S D TQA SE  +  D+Q GQSYR +Y+K+FE+  T+ ++AGYRYST
Sbjct: 61  LGIGKNFGYIGAISIDVTQAKSELNNDRDSQ-GQSYRFLYSKSFES-GTDFRLAGYRYST 118

Query: 507 EGYYAFSDVQDYQKETDSDFDNYNRSHNQRSKMQLSVNQSIGDYGSIYVSGSQQDYWGGD 566
            G+Y F +  D + + DSD++ Y++    RS++Q ++ Q +G YGS+Y++ +QQDYW   
Sbjct: 119 SGFYTFQEATDVRSDADSDYNRYHK----RSEIQGNLTQQLGAYGSVYLNLTQQDYWNDA 174

Query: 567 GKEQLLQLGYNTSIYGISYGFNYNYSKNPGMTEADQVFAFNMSVPLDRFIGSSGASATYN 626
           GK+  +  GYN  I  +SY   Y+++K+P   E+D++++FN+SVPL R      A + Y 
Sbjct: 175 GKQNTVSAGYNGRIGKVSYSIAYSWNKSPEWDESDRLWSFNISVPLGR------AWSNYR 228

Query: 627 MSSKKHGSTVQQAGVSGTLLQGDNLSYSVQQGYENQGNGASGNASMDYKGGSGEGNLGYS 686
           +++ + G T QQ GVSGTLL+  NLSYSVQ+GY + G G SGNA++ Y+GGSG  N+GYS
Sbjct: 229 VTTDQDGRTNQQVGVSGTLLEDRNLSYSVQEGYASNGVGNSGNANVGYQGGSGNVNVGYS 288

Query: 687 YDQESRQWSYGIQGGILLHENGITLSQPLGDTVTLVKAPGADDVNVENNSGVHTDWRGYA 746
           Y ++ RQ +Y ++GG+++H  G+TLSQPLG+T+TL+  PGA +  V NN GV  DW G A
Sbjct: 289 YGKDYRQLNYSVRGGVIVHSEGVTLSQPLGETMTLISVPGARNARVVNNGGVQVDWMGNA 348

Query: 747 VVPYAQPYRKNSVTLETESFADDVDMDMNTQTVIPTRGAVVRAEFKTRVGQRALVQLL-F 805
           +VPYA PYR+N ++L ++S  DDVD++   Q V+PTRGA+VRA F TRVG R L+ LL  
Sbjct: 349 IVPYAMPYRENEISLRSDSLGDDVDVENAFQKVVPTRGAIVRARFDTRVGYRVLMTLLRS 408

Query: 806 MGKPVPFGATVSLL-DNDSTVTGIVSDNGEVYLTGLPETGNIMAKWGNGSNEQCKGAYSL 864
            G PVPFGAT +L+ D  + V+ IV + G++Y++G+PE G ++ KWGN +++QC   Y L
Sbjct: 409 AGSPVPFGATATLITDKQNEVSSIVGEEGQLYISGMPEEGRVLIKWGNDASQQCVAPYKL 468

Query: 865 T 865
           +
Sbjct: 469 S 469