Pairwise Alignments

Query, 884 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 844 a.a., fimbrial protein from Escherichia coli ECRC100

 Score =  590 bits (1520), Expect = e-172
 Identities = 349/871 (40%), Positives = 516/871 (59%), Gaps = 49/871 (5%)

Query: 33  ARSFLLKPLSFFILLSLPGLAFSAET-FNPEMLKSIGDGGDLQGVNLDYFAEKGGQMPGT 91
           A S L   L+  I L     AF+ ++ FNP +L+          +++  F        GT
Sbjct: 2   ASSHLFITLASGICLLCSISAFARDSLFNPRLLEL---DHPADNIDIHQFNRSNTLPAGT 58

Query: 92  YQVDVYLNNQQVDSRNVEFVS-LPDAP-GKLYGAITPAEMADYGVKLDVFPDLKAVAPDA 149
           Y+VDV +N    + + V+F    PDA     Y AI    +A YG+K+D    L  V  D 
Sbjct: 59  YKVDVMINGMLFERQEVKFAQDNPDAELHPCYVAIKNV-LATYGIKVDAIKSLANV-DDK 116

Query: 150 KLTRPLSAYVPQATENLDLNRKRYDITVPQIGVNVRPRNSVDPKRWDNGIPAFMLNYSYS 209
               P+   +  AT  LD ++   +IT+PQI +N      + P RWD GI A M+NY +S
Sbjct: 117 TCVNPVPL-IDGATWLLDASKLALNITIPQIYLNNAVNGYISPSRWDQGINAMMMNYDFS 175

Query: 210 GSTTQRDN-SGQSQSNFVNLRSGANLGAWRLRNYSTYNNQQNEGSHGGDDTNTSNFESIN 268
            S T R N      S ++NLR+G NLGAWR RNYST N+          D N  ++ S++
Sbjct: 176 ASHTIRSNYDDDDDSYYLNLRNGINLGAWRFRNYSTLNSY---------DGNV-DYHSVS 225

Query: 269 TYVQRDVRFLQGGQLTLGEYSTPADVFDSIQFTGAQLASDDQMLPDSMSQFAPTVRGIAK 328
            Y+QRD+  L+  Q+ +G+  T +DVFDS Q  G +L +DD MLP S + FAP V GIAK
Sbjct: 226 NYIQRDIMALRS-QIMIGDTWTASDVFDSTQVRGVRLYTDDDMLPSSQNGFAPVVHGIAK 284

Query: 329 SNAQVTIKQNGYVIYQSNVSPGPFAITDLYPSGNGGDMEVTVTESDGSATKFNIATSSVP 388
           +NA V IKQNGYVIYQS V  G FA+TDL  + +GGD++VT+ E DGS   F    +S+ 
Sbjct: 285 TNATVIIKQNGYVIYQSAVPQGAFALTDLNTTSSGGDLDVTIKEEDGSEQHFIQPFTSLA 344

Query: 389 ILQREGRFKYNMALGKYRTGNDDTETPNFIQLSNIYGLTARTTVYGGVQYAENYRAANVG 448
           IL+REG+   ++++G+ R  ++   TP  +QL  ++G     T+YGG Q A +Y +A +G
Sbjct: 345 ILKREGQTDVDLSIGEVR--DESGFTPEVLQLQAMHGFPLGITLYGGTQLANDYASAALG 402

Query: 449 VGFDLGSAGAVSFDATQATSEFEDSTDTQKGQSYRAMYAKNFEATDTNLQIAGYRYSTEG 508
           +G D+G+ GA+SFD T A S+F D  D + GQSYR +Y+K FE T+T  ++ GYRYS EG
Sbjct: 403 IGKDMGALGAISFDVTHARSQF-DYDDNESGQSYRFLYSKRFEDTNTTFRLVGYRYSMEG 461

Query: 509 YYAFSDVQDYQKETDSDFDNYNRSHNQRSKMQLSVNQSI-GDYGSIYVSGSQQDYWGGDG 567
           +Y  ++    Q + DSDF     + N+RS+ + +  QS    +G+IY++ S+Q+YW  D 
Sbjct: 462 FYTLNEWVSRQ-DNDSDF---WVTGNRRSRFEGTWTQSFTPGWGNIYLTFSRQEYWQTDE 517

Query: 568 KEQLLQLGYNTSIYGISYGFNYNYS------------KNPGMTEADQVFAFNMSVPLDRF 615
            E+LLQ GYN +   IS+  ++NY+             N      +Q+F F+MS+PL  +
Sbjct: 518 VERLLQFGYNNNWRNISWNVSWNYTDSIKRSLGNHHDDNNDDFGKEQIFMFSMSIPLSCW 577

Query: 616 IGSSGASATYNMSSKKHGSTVQQAGVSGTLLQGDNLSYSVQQGY-ENQGNGASGNASMDY 674
           +  S     Y+++   H  +  Q G++GT+L+G NLSY+VQ+ +  +  +  SGNA M Y
Sbjct: 578 MEDS--YVNYSLTQNNHHESTMQVGLNGTMLEGRNLSYNVQESWMHSPDDSYSGNAGMTY 635

Query: 675 KGGSGEGNLGYSYDQESRQWSYGIQGGILLHENGITLSQPLGDTVTLVKAPGADDVNVEN 734
            G  G  N  YS+ ++S+ + YG +GG+L+H +G+T SQ LG+TV LVKAPGA+ +++EN
Sbjct: 636 DGTYGSVNGSYSWSRDSQHFDYGARGGVLVHSDGVTFSQELGETVALVKAPGAEGLSIEN 695

Query: 735 NSGVHTDWRGYAVVPYAQPYRKNSVTLETESFAD-DVDMDMNTQTVIPTRGAVVRAEFKT 793
            +G+ TDWRGY V     PY +N V L ++ F+  +++++     ++PTRGAVV+AEF T
Sbjct: 696 ATGISTDWRGYTVKTQLSPYDENRVALNSDYFSKANIELENTVINLVPTRGAVVKAEFVT 755

Query: 794 RVGQRALVQLLFM-GKPVPFGATVSLLDNDSTVTGIVSDNGEVYLTGLPETGNIMAKWGN 852
            VG R L  +  + GKP+ FGA  +      TVTGIV DNGE+YL+G+PE G  +  WG 
Sbjct: 756 HVGYRVLFNVRQVNGKPIMFGAMATASLETGTVTGIVGDNGELYLSGMPEKGEFLLSWGQ 815

Query: 853 GSNEQCKGAYSLTSSNASDPSALIKQITAQC 883
            ++E+CK AY +T  +  D ++L+ Q+ A C
Sbjct: 816 AADEKCKAAYHIT--HKPDDTSLV-QMDAIC 843