Pairwise Alignments

Query, 884 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 653 a.a., fimbrial biogenesis usher protein from Escherichia coli ECRC100

 Score =  560 bits (1443), Expect = e-163
 Identities = 294/649 (45%), Positives = 407/649 (62%), Gaps = 34/649 (5%)

Query: 239 LRNYSTYNNQQNEGSHGGDDTNTSNFESINTYVQRDVRFLQGGQLTLGEYSTPADVFDSI 298
           LRN ST++    +         T+ ++++++Y+QR V  L+G +LT+G+  T  D FDS+
Sbjct: 1   LRNNSTWSRSSGQ---------TAEWKNLSSYLQRAVIPLKG-ELTVGDDYTAGDFFDSV 50

Query: 299 QFTGAQLASDDQMLPDSMSQFAPTVRGIAKSNAQVTIKQNGYVIYQSNVSPGPFAITDLY 358
            F G QLASDD MLPDS+  FAP VRGIAKSNAQ+TIKQNGY IYQ+ VSPG F I+D+Y
Sbjct: 51  SFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDIY 110

Query: 359 PSGNGGDMEVTVTESDGSATKFNIATSSVPILQREGRFKYNMALGKYRTGNDDTETPNFI 418
            + + GD+ V + E+DGS   +++  SSVP+LQR+GR KY + L KYRT +++ +   F 
Sbjct: 111 STSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFA 170

Query: 419 QLSNIYGLTARTTVYGGVQYAENYRAANVGVGFDLGSAGAVSFDATQATSEFEDSTDTQK 478
           Q +  +G    TT YGG QYAE YRAA  G+GF+LG  GA+SFD TQA S   D ++  K
Sbjct: 171 QATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDVTQAKSTLADQSE-HK 229

Query: 479 GQSYRAMYAKNFEATDTNLQIAGYRYSTEGYYAFSD-----VQDYQKETDSDFDN----- 528
           GQSYR +YAK      TN Q+ GYRYST G+Y  SD     +  Y+     D D      
Sbjct: 230 GQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSR 289

Query: 529 -YNRSHNQRSKMQLSVNQSIGDYGSIYVSGSQQDYWGGDGKEQLLQLGYNTSIYGISYGF 587
            YN  + +R K+Q++++Q + +YGS Y+SGSQQ YW  D +++LLQ GYNT I  +S G 
Sbjct: 290 YYNLFYTKRGKLQVNISQQLSEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGI 349

Query: 588 NYNYSKNPGMTEADQVFAFNMSVPLDRFIGSSGAS---------ATYNMSSKKHGSTVQQ 638
           ++NYSK+ G  +ADQVFA N S+PL+  +  S  S          T N S    G T Q 
Sbjct: 350 SWNYSKSRGQPDADQVFALNFSLPLNLLLSRSNDSYTSKKNYAWMTSNTSIDNEGHTTQN 409

Query: 639 AGVSGTLLQGDNLSYSVQQGYENQGNGASGNASMDYKGGSGEGNLGYSYDQ--ESRQWSY 696
            G++ TLL   NLSYSVQQGY ++G  A+G+ASMDYKG   +  +GY+Y      +Q +Y
Sbjct: 410 LGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGVFADARVGYNYSDNGSQQQLNY 469

Query: 697 GIQGGILLHENGITLSQPLGDTVTLVKAPGADDVNVENNSGVHTDWRGYAVVPYAQPYRK 756
            + G ++ H  GITL Q LG+T  L+ APGA++  V N++G+ TDWRGY VVPYA  YR+
Sbjct: 470 ALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYRE 529

Query: 757 NSVTLETESFADDVDMDMNTQTVIPTRGAVVRAEFKTRVGQRALVQLLFMGKPVPFGATV 816
           N + L+  S   +VD++     V+PT+GA+V AEF    G R L++    G  + FGA +
Sbjct: 530 NRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGISLRFGA-I 588

Query: 817 SLLDNDSTVTGIVSDNGEVYLTGLPETGNIMAKWGNGSNEQCKGAYSLT 865
           + LD   T +GI+ D+G +Y+ GLP  G I  +WG   ++ C  +Y LT
Sbjct: 589 ATLDGVQTNSGIIDDDGSLYMAGLPAKGTITVRWGEAPDQICHISYELT 637