Pairwise Alignments

Query, 640 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Rahnella sp. WP5

Subject, 608 a.a., ATP-dependent RNA helicase RhlE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  299 bits (765), Expect = 3e-85
 Identities = 194/492 (39%), Positives = 272/492 (55%), Gaps = 42/492 (8%)

Query: 8   SFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLH 67
           +F DL L+  I+ A+ + GYE P+PIQ E IP +L+GRD+LG AQTG+GKTAAF+LP+LH
Sbjct: 16  TFDDLNLAPAIVQAVREHGYETPTPIQVEAIPAVLAGRDLLGGAQTGTGKTAAFTLPMLH 75

Query: 68  NIDASLKAP--------QILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQ 119
            +  S +A         + LVL PTRELA QV E++  + KH+   + V ++GG   + Q
Sbjct: 76  RLANSERAKSRFGGVGIRALVLTPTRELAAQVEESVRVYGKHLSLTSTV-VFGGVGMNPQ 134

Query: 120 LRALRQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIP 179
           + A+++G  ++V TPGRLLD  ++G L+LS +  LVLDEAD ML MGFI DV+ I+A +P
Sbjct: 135 INAMKRGVDILVATPGRLLDLQQQGFLDLSTVQMLVLDEADRMLDMGFIHDVKKILALVP 194

Query: 180 AEHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGLRKNEALVR 239
            E Q+ LFSAT  + IR +    +KDP  +++    TT   I+Q    V   +K   LV 
Sbjct: 195 KEKQSLLFSATFSDEIRDLASALLKDPLHIQVTPRNTTVQRITQVIHPVGRGKKKALLVH 254

Query: 240 FLEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDI 299
            +   ++   ++F RTK     VAE L ++G  + AL+G+ +Q  R Q L   K G +  
Sbjct: 255 IINQHNWSQVLVFTRTKFGANNVAEYLTKNGIHAMALHGNKSQGARTQALAGFKSGEIRA 314

Query: 300 LIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLR 359
           L+ATD+AARG+D++ +  VVNY+IP  SE YVHRIGRTGRAG +G A+  V   E   + 
Sbjct: 315 LVATDIAARGIDIDELPHVVNYEIPNISEDYVHRIGRTGRAGNSGEAVNLVSLDEEGFMM 374

Query: 360 NIERTMKLTIPEVEIPTAEVLGERRLAKFAAKVQQQLESSDLDQYRALLAKLQPAEELDV 419
            IER  K  IP V+I    +      A+  A  +Q +            A   P+ E+  
Sbjct: 375 EIERFTKQQIP-VQIFPEFMPEPGEKAEPIAMGRQTIWGG---------AGKPPSREVMA 424

Query: 420 ETLAAALLKMAQGERPLIVAADPVFKSRPPRREFEERGDRGDRGDRRDRPVRSNDRPARD 479
               AA  +M Q  R                 E + RG+ G  G R+        RPA D
Sbjct: 425 AAAKAARTEMLQRVR------------EKKANEPQGRGNGGGGGQRQ--------RPAGD 464

Query: 480 G---DSPRRERR 488
           G   D PR E R
Sbjct: 465 GSQADGPRGEGR 476