Pairwise Alignments

Query, 640 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Rahnella sp. WP5

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  434 bits (1115), Expect = e-126
 Identities = 240/571 (42%), Positives = 357/571 (62%), Gaps = 10/571 (1%)

Query: 4   ELETSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSL 63
           E ET FADLG+SA I+ A+  +GY +PS IQA+ IP +L G DV+G AQTG+GKTA+F +
Sbjct: 2   ENETLFADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGI 61

Query: 64  PLLHNIDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRAL 123
           P++  +D+S K PQ L+L PTRELAVQV   +T  +K+  G+   A+YGG+  D Q+R L
Sbjct: 62  PIVDRVDSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTL 121

Query: 124 RQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQ 183
           ++G Q+VVGTPGR++DH+ RGTL L  +  +VLDEADEML MGF ED+ET+++Q+P + Q
Sbjct: 122 KRGVQIVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQ 181

Query: 184 TALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGLRKNEALVRFLEA 243
           T  FSATM + I  +TR++  +P+ V+IQ    T  +ISQ Y+ V    K E + R +  
Sbjct: 182 TIFFSATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINI 241

Query: 244 EDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILIAT 303
             F+  ++F  TK AT EV E L   G  + AL+GD++QA R++ + + + G   +L+AT
Sbjct: 242 HQFNLGVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVAT 301

Query: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRL-LRNIE 362
           DVAARG+DV+ + +V NYD+P+D E YVHRIGRTGRAGR+G A+ F+  R+    L+++E
Sbjct: 302 DVAARGIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFRLKDLE 361

Query: 363 RTMKLTIPEVEIPTAEVLGERRLAKFAAKVQQQLESSDLDQ-YRALLAKLQPAEELDVET 421
           R +K T+ ++  P+   + +++  +   +V   L   + +Q + A L ++  AE L ++ 
Sbjct: 362 RYIKTTLTKMNPPSVAEMIDQKKDQLVKEVTTSLSKEEDNQVFEAALGQML-AEGLSMDQ 420

Query: 422 LAAALLKMAQGERPLIVAADPVFKSRPPRREFEERGDRGDRG-DRRDRPVRS--NDRPAR 478
           +A  L+K+  G + +   +D  F     R    +RG+RG RG DR +R  R    DRPA 
Sbjct: 421 IALGLVKLQMG-KSIQELSDMNFDLNLGRD--RDRGERGGRGRDRFERGGRKGRGDRPAG 477

Query: 479 DGDSPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTI 538
                 R RR+A    L+ + +G+ D +    IVGAIA E  IS R IG I +F   S +
Sbjct: 478 RKGGRERGRREANMSRLF-LNLGKKDRIRPNDIVGAIAGEAGISGRLIGGIDIFDNFSFV 536

Query: 539 ELPKGMPGEILSHFTRTRILNKPMNMQLIGD 569
           ++P      +++   R  I  KP+NM+L  D
Sbjct: 537 DVPSKDASHVINVMKRNTIKGKPVNMELSKD 567