Pairwise Alignments

Query, 640 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Rahnella sp. WP5

Subject, 629 a.a., ATP-dependent RNA helicase from Escherichia coli BL21

 Score =  996 bits (2574), Expect = 0.0
 Identities = 532/638 (83%), Positives = 561/638 (87%), Gaps = 29/638 (4%)

Query: 4   ELETSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSL 63
           E ET+FADLGL API+ AL DLGYEKPSPIQAECIPHLL+GRDVLGMAQTGSGKTAAFSL
Sbjct: 3   EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 62

Query: 64  PLLHNIDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLRAL 123
           PLL N+D  LKAPQILVLAPTRELAVQVAEAMTDFSKHM GVNVVALYGGQRYDVQLRAL
Sbjct: 63  PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122

Query: 124 RQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQ 183
           RQGPQ+VVGTPGRLLDHLKRGTL+LS LSGLVLDEADEMLRMGFIEDVETIMAQIP  HQ
Sbjct: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQ 182

Query: 184 TALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGLRKNEALVRFLEA 243
           TALFSATMPEAIRRITRRFMK+PQEVRIQSSVTTRPDISQSYW+V+G+RKNEALVRFLEA
Sbjct: 183 TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEA 242

Query: 244 EDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILIAT 303
           EDFDAAIIFVRTKNATLEVAEALER+GY+SAALNGDMNQALREQTLERLKDGRLDILIAT
Sbjct: 243 EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 302

Query: 304 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIER 363
           DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIER
Sbjct: 303 DVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIER 362

Query: 364 TMKLTIPEVEIPTAEVLGERRLAKFAAKVQQQLESSDLDQYRALLAKLQP---AEELDVE 420
           TMKLTIPEVE+P AE+LG+RRL KFAAKVQQQLESSDLDQYRALL+K+QP    EELD+E
Sbjct: 363 TMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLE 422

Query: 421 TLAAALLKMAQGERPLIVAADPVFKSRPPRREFEERGDRGDRGDRRDRPVRSNDRPARDG 480
           TLAAALLKMAQGER LIV  D   +   P+REF +R DRG R DR DR  R +       
Sbjct: 423 TLAAALLKMAQGERTLIVPPDAPMR---PKREFRDRDDRGPR-DRNDRGPRGDRE----- 473

Query: 481 DSPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIEL 540
           D PRRERRD G+M+LYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLF +HSTIEL
Sbjct: 474 DRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL 533

Query: 541 PKGMPGEILSHFTRTRILNKPMNMQLIGDAVPQ--APRRDRPAGAGGERRGNGAPRPFNG 598
           PKGMPGE+L HFTRTRILNKPMNMQL+GDA P     RR    G GGERR  G  R F+G
Sbjct: 534 PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGG--RNFSG 591

Query: 599 ERREGARGTGAPRTFSGDRREGASAAGDRRPPSRAPRR 636
           ERREG RG G  R FSG+RREG           RAPRR
Sbjct: 592 ERREGGRGDG--RRFSGERREG-----------RAPRR 616