Pairwise Alignments

Query, 390 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 909 a.a., Ribosome-associated ATPase from Xanthobacter sp. DMC5

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 87/378 (23%), Positives = 152/378 (40%), Gaps = 43/378 (11%)

Query: 25  RETRHAFRKPVIHWLCWIFPLLLFGLISSNFSEGTLLD---LPVSVVDNDHSPLSKTLIR 81
           RET    R PV       F LL    +   F  G  LD   L  +V+D D +P S+  I 
Sbjct: 549 RETLELKRDPVR----LAFALLGTAFLMIIFGYGITLDVDRLRFAVLDRDQTPESRAYID 604

Query: 82  KLDAGSHAHVQAFEGGLPEAEYRLRTAQDYALLYIPNDFEADVLAGKQPSAVLYYNALFY 141
                ++  +Q       + + RL++      + +P  F AD+ +G+Q   ++  +    
Sbjct: 605 GFAHSTYFRIQPPLTSPDDLDRRLKSNAIAFAIELPPSFGADLRSGRQTEVLVTID---- 660

Query: 142 GAGLYSTQDFSGLITELNTRYRSIIATEMGKTLPSLASVDVSYGSLFNASGSYIYYQQFA 201
           GA  +  +   G +  ++T + +  A   G+   + A +++ Y           Y Q F 
Sbjct: 661 GAMPFRAETIKGYVEAVHTLFLADAAQAAGRAYSAFAGLEMRYR----------YNQSFR 710

Query: 202 ATIHLLQLFTVTCMIYVMARSQALLSAPSFTLA---------------LLGKLAPYTLCF 246
           +   ++       +I++ A   AL       L                LLGK APY    
Sbjct: 711 SLDAMVPANIALMLIFIPAILTALGVVTEKELGSITNLYVTPVTKLEFLLGKQAPYVGVA 770

Query: 247 TTLLMAEIAMLVGFFDARVSGNPLYMLLIGFFYVIAAQSLGLLLFTFTKTTITAY--TMM 304
               +  + M +  F   + G+ L + L  F YV+A  ++GL+  T T T + A   T +
Sbjct: 771 LFNFVVMVLMALFLFGVPLKGSFLGLALGAFAYVLATTAIGLVSSTLTNTQVAALFGTAI 830

Query: 305 GIFVSIALTFSGMAVPVLSMPLPARIISGIEPLSYALAAMFDVFLREVSVRGIL-MVCCI 363
           G  +  A  FSGM  PV S+     ++    P +Y +      F + +S   +L  +   
Sbjct: 831 GTMMP-ATQFSGMLQPVTSLEGGGWVLGTFFPTTYFMRVSVGAFTKGLSFTELLPFIMAT 889

Query: 364 LLVYPLLTS---LLVRKR 378
              +P L +   L++RK+
Sbjct: 890 AAFWPALLAIAFLILRKQ 907