Pairwise Alignments

Query, 672 a.a., cyclic di-GMP phosphodiesterase from Rahnella sp. WP5

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  337 bits (864), Expect = 2e-96
 Identities = 202/556 (36%), Positives = 313/556 (56%), Gaps = 13/556 (2%)

Query: 106  EVGLTFAEQVVSEANSVIVIIDQEGKIHRFNRLSEEYTGLREEDVIGRSAYDLFMSMEEG 165
            E  L  A  V   + S I+I D  G I + N      +G    DV+ +    L +  ++ 
Sbjct: 719  EKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQLPNMLTVDEQQE 778

Query: 166  LASRQNINGFFQHQQSYEVERWINTVKGQRLFLFRN-KFVHSGSGKQQKYLICSGSDITD 224
               R  +    QH  ++E E W+    G+    +     V    G    Y +C  SDI++
Sbjct: 779  AHLRYVLKQLHQHS-TWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLASY-VCFFSDISE 836

Query: 225  ERKAQERLRVLANTDLVTGFANRNALQESLARAL--IERGENNVGLIYLDLDNFKKVNDA 282
             + +++R+  LA  D +T   NR   Q+ L  AL   ER ++ V L++LDLD FK +ND+
Sbjct: 837  RKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDS 896

Query: 283  YGHMFGDHLLRAVSDAIQDCLSPNDKLARLGGDEFIIL---STHAEIKALEAL--SQRVL 337
             GH  GD +L+ ++  +  C++ +D +AR+GGDEF +L     + E+    A+  ++++L
Sbjct: 897  LGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIHVAEQIL 956

Query: 338  RRLSLPFRIGLIEVYTGCSAGIAICPEHGTDGDILLQNADTAMYAAKEKGKNVHCVFSPE 397
              L  PF +   E +   S GIA+ P+ G +   L++NADTAMY AKE+GKN    +  +
Sbjct: 957  ASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQAD 1016

Query: 398  MNEKASEYMWLDTHLRKALSEKDQLVLHYQPKVSLYGT-VQSVEALLRWNSPERGLIQPQ 456
            MN  A E + L++ LR AL E+++ VL+YQP+ S  G  +   EALLRW  P RGL+ P 
Sbjct: 1017 MNASALERLELESDLRHAL-EQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPG 1075

Query: 457  SFIPYAEESGLITPVGKWVIETATRQATEWQKKGLNL-RVAVNLSGRQLNNSAFITTLSD 515
             FIP  EE GL+  VG WVI  A RQ   W +  + + +V+VN+S RQ ++    T ++ 
Sbjct: 1076 DFIPVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFSDGQLGTRIAT 1135

Query: 516  AMKNAGMKGCLLDFELTESCLVEDEGAAITMINQLHKLGAQVHLDDFGTGYSSLSQLARI 575
             +K+ G+    L+ ELTES L+ +   A+ +++ L  LG  + +DDFGTGYSSL+ L + 
Sbjct: 1136 ILKDTGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQF 1195

Query: 576  PLDCIKLDQSFIRGINDNPVSQALVRAIVAVAKTLQLTVVAEGVETAEEEKLIDEIGVDS 635
            P+D +K+D++F+ G+        + RAI+A+A +L L V+AEGVET E+   + E G D 
Sbjct: 1196 PIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDE 1255

Query: 636  KQGFLYAKPMPANELE 651
             QG+L+ +PMPAN  E
Sbjct: 1256 VQGYLFGRPMPANRFE 1271