Pairwise Alignments

Query, 672 a.a., cyclic di-GMP phosphodiesterase from Rahnella sp. WP5

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  326 bits (836), Expect = 4e-93
 Identities = 203/589 (34%), Positives = 323/589 (54%), Gaps = 14/589 (2%)

Query: 73   PARLYLVGRKIDSKAWAGTASAYQDTESVAHDLEVGLTFAEQVVSEANSVIVIIDQEGKI 132
            P  L LV    D + + G     +D  S     E  L  A  V   + S I+I D  G I
Sbjct: 680  PIELRLVLVWDDDQRFEGVLGVGRDI-SQQRRAEKDLRMAATVFEHSTSAILITDPAGYI 738

Query: 133  HRFNRLSEEYTGLREEDVIGRSAYDLFMSMEEGLASRQNINGFFQHQQSYEVERWINTVK 192
             + N      +G    +V+ +    L +  ++    R  +    Q + S+E E W+    
Sbjct: 739  VQANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLHQ-RGSWEGEVWLKRRD 797

Query: 193  GQRLFLFRN-KFVHSGSGKQQKYLICSGSDITDERKAQERLRVLANTDLVTGFANRNALQ 251
            G     +     V    G    Y +C  +DI++ + +++R+  LA  D +T   NR   Q
Sbjct: 798  GDHYPAWVGITAVLDDEGDLASY-VCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQ 856

Query: 252  ESLARAL--IERGENNVGLIYLDLDNFKKVNDAYGHMFGDHLLRAVSDAIQDCLSPNDKL 309
            + L  AL   ER +  V L++LDLD FK +ND+ GH  GD +L+ ++  +  C+  +D +
Sbjct: 857  DRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTV 916

Query: 310  ARLGGDEFIILSTHAEIKALEA-----LSQRVLRRLSLPFRIGLIEVYTGCSAGIAICPE 364
            AR+GGDEF +L      + +       +++ +L  L  PF +   E +   S GIA+ P+
Sbjct: 917  ARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQ 976

Query: 365  HGTDGDILLQNADTAMYAAKEKGKNVHCVFSPEMNEKASEYMWLDTHLRKALSEKDQLVL 424
             G++   L++NADTAMY AKE+GKN    +  EMN  A E + L++ LR A+ E+++ +L
Sbjct: 977  DGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELESDLRHAM-EQNEFIL 1035

Query: 425  HYQPKVSLYGT-VQSVEALLRWNSPERGLIQPQSFIPYAEESGLITPVGKWVIETATRQA 483
            +YQP+ S  G  +   EALLRW  P RGL+ P  FIP  EE GL+  VG WV+  A+RQ 
Sbjct: 1036 YYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQL 1095

Query: 484  TEWQKKGLNL-RVAVNLSGRQLNNSAFITTLSDAMKNAGMKGCLLDFELTESCLVEDEGA 542
              W K  + + +V+VN+S RQ ++    T +++ ++ +G+    L+ ELTES L+ +   
Sbjct: 1096 KAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILMREVNE 1155

Query: 543  AITMINQLHKLGAQVHLDDFGTGYSSLSQLARIPLDCIKLDQSFIRGINDNPVSQALVRA 602
            A+ ++  L  LG  + +DDFGTGYSSL+ L + P+D +K+D++F+ G+ +      + RA
Sbjct: 1156 ALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARA 1215

Query: 603  IVAVAKTLQLTVVAEGVETAEEEKLIDEIGVDSKQGFLYAKPMPANELE 651
            I+A+A +L L V+AEGVET E+ + + E G D  QG+L+ +PMPA++ E
Sbjct: 1216 IIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPAHQFE 1264