Pairwise Alignments

Query, 354 a.a., recombinase RecA from Rahnella sp. WP5

Subject, 352 a.a., recombinase RecA from Pseudomonas simiae WCS417

 Score =  508 bits (1308), Expect = e-149
 Identities = 251/351 (71%), Positives = 296/351 (84%)

Query: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62
           +D+NK+KALAAALGQIE+QFGKG++MR+G+     +  ISTGSL LDIALG GGLP GRI
Sbjct: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60

Query: 63  VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120

Query: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D L RS A+DVI+VDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180

Query: 183 LKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVGSE 242
           +KNAN L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR GA+KEGD VVGSE
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 243 TRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIGQG 302
           TRVKVVKNK+A PF+QAEFQILYG+GI +NGE+IDLGV H  +EK+GAWY+YNG KIGQG
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300

Query: 303 KANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTAEDADDNMETSEE 353
           KANS  +L +NP +AA L+K++RD LL+   ++  A   E  ++  E   +
Sbjct: 301 KANSAKFLADNPDIAATLEKQIRDKLLTAAPDVKAAANREPVEEVEEADTD 351