Pairwise Alignments

Query, 354 a.a., recombinase RecA from Rahnella sp. WP5

Subject, 353 a.a., RecA protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  604 bits (1557), Expect = e-177
 Identities = 310/354 (87%), Positives = 330/354 (93%), Gaps = 1/354 (0%)

Query: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG 60
           MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG
Sbjct: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG 60

Query: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP 120
           RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP+YA+KLGVDIDNLLCSQP
Sbjct: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQP 120

Query: 121 DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           DTGEQALEICDAL RSGAVDVI+VDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
Sbjct: 121 DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180

Query: 181 GNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVG 240
           GNLK +NTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGA+KEGD VVG
Sbjct: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG 240

Query: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIG 300
           SETRVKVVKNKIAAPFKQAEFQILYGEGIN  GEL+DLGVK KLIEKAGAWYSYNGEKIG
Sbjct: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIG 300

Query: 301 QGKANSCNYLKENPKVAAELDKKLRDMLLSGTGELSVATTAEDADDNMETSEEF 354
           QGKAN+  +LKENP  A E++K++R++LLS     +     +D++   ET+E+F
Sbjct: 301 QGKANATTWLKENPATAKEIEKRVRELLLSNQ-NATPDFAVDDSEGVAETNEDF 353