Pairwise Alignments

Query, 354 a.a., recombinase RecA from Rahnella sp. WP5

Subject, 353 a.a., recombinase A (NCBI) from Escherichia coli BW25113

 Score =  602 bits (1551), Expect = e-177
 Identities = 312/357 (87%), Positives = 333/357 (93%), Gaps = 7/357 (1%)

Query: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG 60
           MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG
Sbjct: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG 60

Query: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP 120
           RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYA+KLGVDIDNLLCSQP
Sbjct: 61  RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQP 120

Query: 121 DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           DTGEQALEICDAL RSGAVDVI+VDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
Sbjct: 121 DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180

Query: 181 GNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVG 240
           GNLK +NTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGA+KEG+ VVG
Sbjct: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG 240

Query: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIG 300
           SETRVKVVKNKIAAPFKQAEFQILYGEGIN  GEL+DLGVK KLIEKAGAWYSY GEKIG
Sbjct: 241 SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIG 300

Query: 301 QGKANSCNYLKENPKVAAELDKKLRDMLLS---GTGELSVATTAEDADDNMETSEEF 354
           QGKAN+  +LK+NP+ A E++KK+R++LLS    T + SV    +D++   ET+E+F
Sbjct: 301 QGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSV----DDSEGVAETNEDF 353