Pairwise Alignments

Query, 278 a.a., transporter substrate-binding domain-containing protein from Rahnella sp. WP5

Subject, 243 a.a., arginine transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 32/267 (11%)

Query: 1   MKKIALLIAALITAGAAGTAQADTLSDIKSSGKITVGIDPTFPPYEFTNDKGEITGYSVA 60
           MKK+  LIAALI   +     A+T         I    + ++PP+E  +   +I G+ V 
Sbjct: 1   MKKV--LIAALIAGFSLSATAAET---------IRFATEASYPPFESIDANNQIVGFDVD 49

Query: 61  IMQSFAKDLGVKLEFQKTAFSGILPGLISGSFNAEGSSLNVTAERAKKVLFTVPYSKTVN 120
           + Q+  K++     F   AF  ++P L      A  + +++T ER K+VLFT PY    +
Sbjct: 50  LAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTTPYYDN-S 108

Query: 121 GVLVREADVKKFSGKTLSPEQLSGLSGAVKSASVPEQLLKGFNETLTKEGKKPITIISVD 180
            + V +       GK  S +QL G    V++ +  ++ +         +    IT +  D
Sbjct: 109 ALFVGQ------QGKYTSVDQLKGKKVGVQNGTTHQKFI--------MDKHPEITTVPYD 154

Query: 181 TLDQTVSTLMTKRADFVFDDISVLAPIVKKYPNKVAQVGEAGPSQ-----WMAWATRKDD 235
           +       L   R D VF D +V+   +K  P K+A VG+    +      +  A R+ +
Sbjct: 155 SYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNP-KLAAVGDKVTDKDYFGTGLGIAVRQGN 213

Query: 236 TRLNKAISDHILAMQKDGELTTLQKQY 262
           T L + ++  +  ++KDG   T+  ++
Sbjct: 214 TELQQKLNTALEKVKKDGTYETIYNKW 240