Pairwise Alignments

Query, 647 a.a., exoribonuclease II from Rahnella sp. WP5

Subject, 644 a.a., Exoribonuclease II (EC 3.1.13.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  949 bits (2452), Expect = 0.0
 Identities = 462/646 (71%), Positives = 538/646 (83%), Gaps = 3/646 (0%)

Query: 1   MFQDNPLLAQLKQQLHSQTPRVEGIVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRV 60
           MFQDNPLLAQLKQQLHSQTPR EG+VK TEKGFGFLEVD QKSYFIPPP MKKVMHGDR+
Sbjct: 1   MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI 60

Query: 61  IASLQTEKEREVVQPETLVEPFLSRFVGRVTKKDDRLSIIPDHPLLRDAIQCRVARNINH 120
           +A + TEKERE  +PE L+EPFL+RFVG+V  K+DRLSI+PDHPLL+DAI CR AR + H
Sbjct: 61  VAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH 120

Query: 121 EVSDGDWCVAEMRRHPLKEGDHSFQAEITEWITTGADDLAPWWVTLARHNLEREAPKSDI 180
           E  +GDW VAEMRRHPLK GD SF A++T++IT   D   PWWVTLARHNLE+EAP    
Sbjct: 121 EFKEGDWAVAEMRRHPLK-GDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVA 179

Query: 181 AELRDEGLTREDLTALPFVTIDSGSTQDMDDALYVKDNGDGTLQMTVAIADPTAYVSEGS 240
            E+ DEGL R+DLTAL FVTIDS ST+DMDDALY ++  DG LQ+TVAIADPTA+++EGS
Sbjct: 180 TEMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGS 239

Query: 241 ELDNIAKKRAFTNYLPGFNIPMLPRELSDDICSLWPDVSRPVLACSVTVGADGSLGSDIR 300
           +LDN AK RAFTNYLPGFNIPMLPRELSDD+CSL  +  RP LAC + + ADG++  DI 
Sbjct: 240 KLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIA 299

Query: 301 FFAATIESKAKLAYDDVSDWLEADEKSEWQPASEVIASQIRLLKRVCDVRSAWRTEHALV 360
           FFAATIESKAKLAYD+VSDWLE      WQP +E IA QIRLL R+C  RS WR  HALV
Sbjct: 300 FFAATIESKAKLAYDNVSDWLE--NNGTWQPDNEGIAQQIRLLHRICLSRSEWRHHHALV 357

Query: 361 FKDRPDYRFVLGEKGNVLEIIAEHRRIANRIVEESMIAANVCAAIALRDSLGFGVYNVHT 420
           FKDRPDYRFVLGEKG VL+I+AE RRIANRIVEESMIAAN+CAA  LRD LGFG+YNVHT
Sbjct: 358 FKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHT 417

Query: 421 GFDPLLVENAVTVLQANDVEANAEELLTLPGFCALRRKLDALPTQFLDSRIRRFQTFAEI 480
           GFDP   +    +L+ + +  +AEE+LTL GFC LRR+LDA P+ FLDSRIRRFQ+FAEI
Sbjct: 418 GFDPANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEI 477

Query: 481 STTPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAMILQQSAEKPQDDMTIQLAERRRA 540
           ST PGPHFGLGLEAYATWTSPIRKYGDM+NHRLLKA+I  ++  +PQ+D+T Q+AERRR 
Sbjct: 478 STEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRL 537

Query: 541 NRMAERDVGDWLYARYLEDKVGTDVKFSAEIIDVTRGGLRIRLQDIGAVAFIPAPFLHSV 600
           NRMAERDVGDWLYAR+L DK GT+ +F+AEIIDV+RGG+R+RL D GA+AFIPAPFLH+V
Sbjct: 538 NRMAERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAV 597

Query: 601 RDELVCSADTGTVLIKGEVAYRQSDIIEVNIAEVRMENRNVIAKPA 646
           RDELVCS + GTV IKGE  Y+ +D+I+V IAEVRME R++IA+PA
Sbjct: 598 RDELVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPA 643