Pairwise Alignments

Query, 650 a.a., DNA topoisomerase III from Rahnella sp. WP5

Subject, 653 a.a., DNA topoisomerase III (NCBI) from Escherichia coli BW25113

 Score = 1089 bits (2817), Expect = 0.0
 Identities = 529/646 (81%), Positives = 582/646 (90%), Gaps = 1/646 (0%)

Query: 2   MRLFIAEKPSLARAIADVLPKPHRRGDGYIACGNDQVVTWCVGHLLEQAQPDAYDSRFAR 61
           MRLFIAEKPSLARAIADVLPKPHR+GDG+I CGN QVVTWC+GHLLEQAQPDAYDSR+AR
Sbjct: 1   MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR 60

Query: 62  WSLADLPIIPEKWQLQPRSSVAKQLNVIKRLLLEASQVVHAGDPDREGQLLVDEVLDYLE 121
           W+LADLPI+PEKWQLQPR SV KQLNVIKR L EAS++VHAGDPDREGQLLVDEVLDYL+
Sbjct: 61  WNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQ 120

Query: 122 LTPEKRHATQRCLINDLNPQAVERAIERLRDNRDFIPLCVSALARARADWLYGINMTRAY 181
           L PEKR   QRCLINDLNPQAVERAI+RLR N +F+PLCVSALARARADWLYGINMTRAY
Sbjct: 121 LAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAY 180

Query: 182 TILGRNAGYNGVLSVGRVQTPVLGLVVRRDEDIENFVPKDFFEVKAHIVTPAEEHFVALW 241
           TILGRNAGY GVLSVGRVQTPVLGLVVRRDE+IENFV KDFFEVKAHIVTPA+E F A+W
Sbjct: 181 TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW 240

Query: 242 QPSDSCEPYQDEEGRLLHRPLADHVVARIAGQPAMVTGYNDKRENDIAPLPFSLSTLQIE 301
           QPS++CEPYQDEEGRLLHRPLA+HVV RI+GQPA+VT YNDKRE++ APLPFSLS LQIE
Sbjct: 241 QPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIE 300

Query: 302 GSKAFGLSAQQILDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVLNAIGVHRPDLMP 361
            +K FGLSAQ +LDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAV+NAI VH PDL+P
Sbjct: 301 AAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLP 360

Query: 362 QPAVDTDLRNRCWDDKKVDAHHAIIPTARSSNVNLTDDERKIYGLVARQYLMQFCPDAVY 421
           QP VD D+RNRCWDDKKVDAHHAIIPTARSS +NLT++E K+Y L+ARQYLMQFCPDAV+
Sbjct: 361 QPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVF 420

Query: 422 RKCVIDLDIAGGKFIAKARFLAEAGWRTLLGSKERDEENEGTPLPVVAKGDELLCERGEV 481
           RKCVI+LDIA GKF+AKARFLAEAGWRTLLGSKERDEEN+GTPLPVVAKGDELLCE+GEV
Sbjct: 421 RKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEV 480

Query: 482 VERQTQPPRPFTDATLLSAMTGIARFVQDKELKKILRATDGLGTEATRAGIIELLFRREF 541
           VERQTQPPR FTDATLLSAMTGIARFVQDK+LKKILRATDGLGTEATRAGIIELLF+R F
Sbjct: 481 VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGF 540

Query: 542 LYKKGRYIHSSDTGRALIHSLPDIAARPDMTADWESTLTRISEKSCRYQDFMQPLVATLQ 601
           L KKGRYIHS+D G+AL HSLP++A RPDMTA WES LT+ISEK CRYQDFMQPLV TL 
Sbjct: 541 LTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY 600

Query: 602 NLIMQAKTNRVSSAFRSLPSKPAGAAAKGKSAPKRRKASTKGKEAN 647
            LI QAK   V   FR + +  +G +A  K A  R++++ K   A+
Sbjct: 601 QLIDQAKRTPVRQ-FRGIVAPGSGGSADKKKAAPRKRSAKKSPPAD 645