Pairwise Alignments

Query, 323 a.a., ribose ABC transporter permease from Rahnella sp. WP5

Subject, 331 a.a., Predicted ABC-type sugar transport system, permease component from Enterobacter asburiae PDN3

 Score =  243 bits (621), Expect = 4e-69
 Identities = 143/318 (44%), Positives = 202/318 (63%), Gaps = 9/318 (2%)

Query: 3   SQTLPAKKRWISKEWLLEQKSLIALLVLI-AVVSSMSPNFFTVNNLFNILQQTSVNAIMA 61
           +++  AKK  +S   L++   ++ +L+LI AV   ++PNFFT +NL NI +Q S+N ++A
Sbjct: 11  AKSASAKKLLMSD--LMQTVGILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLA 68

Query: 62  VGMTLVILTSGIDLSVGSLLALTGAVAASIVGLEVN-AFVAVCAALALGAAVGGVTGMIV 120
            GMT +ILT GIDLSVGS+L  T AVAA +V L    A +++ AAL LG  +G   G +V
Sbjct: 69  AGMTFIILTGGIDLSVGSILGTT-AVAAMVVSLIPEFAMLSIPAALMLGMVLGLFNGALV 127

Query: 121 AKGKVQAFIATLVMMLLLRGITMVYTNGSPISTGFNDVADVFGWFGIGRPLGIPTPVWLM 180
           A   +  FI TL     LRG   +  +G+ +    ++++  F W G      IP  V + 
Sbjct: 128 AFAGLPPFIVTLGTYTALRGAAYLLADGTTVIN--SNIS--FEWIGNNYLGPIPWLVVIA 183

Query: 181 AVVFIAAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALASIIEV 240
             V    W++L  T LG +IYA+GGN  A RL+GI V  V + VY + GLL+ L  ++  
Sbjct: 184 LAVIAICWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSA 243

Query: 241 ARLSSAQPNAGTGYELDAIAAVVLGGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGVSS 300
           +RL SA  N GTGYELDAIAAV+LGGTS  GG G I GTL+GALI+  LNNG+ L+GVS 
Sbjct: 244 SRLYSANGNLGTGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSY 303

Query: 301 YYQMIVKAVVILLAVLVD 318
           ++Q+++K  VI++AVL+D
Sbjct: 304 FWQLVIKGAVIIIAVLID 321