Pairwise Alignments

Query, 323 a.a., ribose ABC transporter permease from Rahnella sp. WP5

Subject, 324 a.a., ribose ABC transporter permease from Escherichia coli ECRC101

 Score =  242 bits (617), Expect = 1e-68
 Identities = 143/320 (44%), Positives = 199/320 (62%), Gaps = 11/320 (3%)

Query: 2   SSQTLPAKKRWISKEWLLEQKSLIALLVLI-AVVSSMSPNFFTVNNLFNILQQTSVNAIM 60
           +S    AKK  +S   L++   ++ +L+LI AV   ++PNFFT +NL NI +Q S+N ++
Sbjct: 3   TSAKTSAKKMLMSD--LMQTVGILPILILIVAVFGFITPNFFTESNLLNITRQASINIVL 60

Query: 61  AVGMTLVILTSGIDLSVGSLLALTGAVAASIVGLEVN-AFVAVCAALALGAAVGGVTGMI 119
           A GMT +ILT GIDLSVGS+L  T AVAA +V L    A +++ AAL LG  +G   G +
Sbjct: 61  AAGMTFIILTGGIDLSVGSILGTT-AVAAMVVSLSPEFAMLSIPAALMLGLLLGLFNGAL 119

Query: 120 VAKGKVQAFIATLVMMLLLRGITMVYTNGSP-ISTGFNDVADVFGWFGIGRPLGIPTPVW 178
           VA   +  FI TL     LRG   +  +G+  I++  N     F W G      +P  V 
Sbjct: 120 VAFAGLPPFIVTLGTYTALRGAAYLLADGTTVINSNIN-----FEWIGNNYLGPVPWLVV 174

Query: 179 LMAVVFIAAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALASII 238
           +   V +  W++L  T LG +IYA+G N  A RL+GI V  V + VY + GLL+ L  I+
Sbjct: 175 IALAVIVVCWFILRRTTLGVHIYAVGSNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIM 234

Query: 239 EVARLSSAQPNAGTGYELDAIAAVVLGGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGV 298
             +RL SA  N G GYELDAIAAV+LGGTS  GG G I GTL+GALI+  LNNG+ L+GV
Sbjct: 235 SASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGV 294

Query: 299 SSYYQMIVKAVVILLAVLVD 318
           S ++Q+++K  +I++AVL+D
Sbjct: 295 SYFWQLVIKGAMIIIAVLID 314