Pairwise Alignments

Query, 323 a.a., ribose ABC transporter permease from Rahnella sp. WP5

Subject, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

 Score =  543 bits (1399), Expect = e-159
 Identities = 277/320 (86%), Positives = 307/320 (95%), Gaps = 1/320 (0%)

Query: 1   MSSQTLPAKKRWISKEWLLEQKSLIALLVLIAVVSSMSPNFFTVNNLFNILQQTSVNAIM 60
           M++QT+  + R+ +K WL+EQKSLIALLVLIA+VS++SPNFFT+NNLFNILQQTSVNAIM
Sbjct: 1   MTTQTVSGR-RYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIM 59

Query: 61  AVGMTLVILTSGIDLSVGSLLALTGAVAASIVGLEVNAFVAVCAALALGAAVGGVTGMIV 120
           AVGMTLVILTSGIDLSVGSLLALTGAVAASIVG+EVNA VAV AALALGAA+G VTG+IV
Sbjct: 60  AVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIV 119

Query: 121 AKGKVQAFIATLVMMLLLRGITMVYTNGSPISTGFNDVADVFGWFGIGRPLGIPTPVWLM 180
           AKG+VQAFIATLVMMLLLRG+TMVYTNGSP++TGF + AD+FGWFGIGRPLG+PTPVW+M
Sbjct: 120 AKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIM 179

Query: 181 AVVFIAAWYMLHHTRLGRYIYALGGNESATRLSGISVDKVKIIVYSLCGLLAALASIIEV 240
            +VF+AAWYMLHHTRLGRYIYALGGNE+ATRLSGI+V+K+KIIVYSLCGLLA+LA IIEV
Sbjct: 180 GIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEV 239

Query: 241 ARLSSAQPNAGTGYELDAIAAVVLGGTSLSGGKGRIVGTLIGALILGFLNNGLNLLGVSS 300
           ARLSSAQP AGTGYELDAIAAVVLGGTSL+GGKGRIVGTLIGALILGFLNNGLNLLGVSS
Sbjct: 240 ARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSS 299

Query: 301 YYQMIVKAVVILLAVLVDNK 320
           YYQMIVKAVVILLAVLVDNK
Sbjct: 300 YYQMIVKAVVILLAVLVDNK 319