Pairwise Alignments

Query, 847 a.a., fimbrial biogenesis outer membrane usher protein from Rahnella sp. WP5

Subject, 866 a.a., putative outer membrane fimbrial subunit export usher protein from Escherichia coli BL21

 Score =  597 bits (1540), Expect = e-175
 Identities = 337/851 (39%), Positives = 493/851 (57%), Gaps = 50/851 (5%)

Query: 27  LGGLLASTALGLLAAHPARSENVYFDPQFIERQAGDVGDIDLSLFQSNDQAQLPGNYDTA 86
           +GGL+   +    AA  A++E  +FDP F +     V D  LS F+   Q   PG Y   
Sbjct: 20  IGGLVVFVS----AAFNAQAET-WFDPAFFKDDPSMVAD--LSRFEKG-QKITPGGYRVD 71

Query: 87  LYVNKKLKIRHSISYLS-KPDGTLEPQITPDILRLLGVNVDAFPALKNHQPDAPLGSLAQ 145
           + +N+ +    +++++   P+  +   +T + L  +GVN DAFPA K     A +  LA+
Sbjct: 72  IVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQLDKQACV-PLAE 130

Query: 146 YIPAADVKFDFYLMQLNFSIPQAAILQKAEDYIDPEKWDDGAPVLFSNYSYSGGQRSYRN 205
            IP A V F+   ++L  S+PQ AI   A  Y+ PE+WD+G   L   YS+SG    + +
Sbjct: 131 IIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINALLLGYSFSGANSIHSS 190

Query: 206 GSDDS--SQYLNLQNGFNIGPWRLRNYTTYS-NSGDEKRWDTISTYAERDIKTLKSKFQI 262
              DS  S +LNL +G N+GPWRLRN +T+S +SG    W  +S+Y +R +  LK +  +
Sbjct: 191 ADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTV 250

Query: 263 GENSTSGEILSSVPFSGVQLFSDDNMLPNSQRGFAPTIRGIANSNAEVTIRQNDHIIYQS 322
           G++ T+G+   SV F GVQL SDDNMLP+S +GFAP +RGIA SNA++TI+QN + IYQ+
Sbjct: 251 GDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQT 310

Query: 323 FVPPGAFEINDLYPSSYSGNLEITVKEADGTERRFNQPFSAIPIMQRPGRLKYSATAGTY 382
           +V PGAFEI+DLY +S SG+L + +KEADG+   ++ PFS++P++QR GR+KY+ T   Y
Sbjct: 311 YVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKY 370

Query: 383 RATDNNEKEPTFAQGTAIYGISNTITSYGGSVVSEDYLSGLIGIGYNLRWLGGISADVTH 442
           R   N ++E  FAQ T  +G     T YGG   +E Y + + G+G+N    G IS D T 
Sbjct: 371 RTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNFGDFGAISFDATQ 430

Query: 443 ARSTLDNNQTTSGQSYRVQYSKNIEMTDTDFSLASYRYSSAGYYDFDEST-------QYL 495
           A+STL +     GQSYR  Y+K +    T+F L  YRYS++G+Y   ++        ++ 
Sbjct: 431 AKSTLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFN 490

Query: 496 DGDNVP--------ELDYHKRSKIQFNINQTLWQGASLYLSGYKQDYWNNSGKEKNLSLG 547
           DGD+           L Y KR K+Q NI+Q L +  S YLSG +Q YW+   +++ L  G
Sbjct: 491 DGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFG 550

Query: 548 LNNSLFGISYNLSYSYSQLQDQ-DNDQQISLNVRIPLSRWLPQS-----------WGTYN 595
            N  +  +S  +S++YS+ + Q D DQ  +LN  +PL+  LP+S           W T N
Sbjct: 551 YNTQIKDLSLGISWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSN 610

Query: 596 VSHQKGEGTRHQVGLSGTALDDRRLSYSVQQSYTDHNSESGSNLYSSYRSSFGNLNAGYN 655
            S      T   +GL+ T LDD  LSYSVQQ Y      +  +    Y+ +F +   GYN
Sbjct: 611 TSIDNEGHTTQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYN 670

Query: 656 YSRD--SQQLSYGIAGGIVAHSRGATLSQPLGDSFALIDTNGASGARLQNLPGVRTDWRG 713
           YS +   QQL+Y ++G +VAHS+G TL Q LG++  LI   GA   R+ N  G++TDWRG
Sbjct: 671 YSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRG 730

Query: 714 FAVVPYLTAYNENRIAMDTTTLPDDVDIENTSAIVIPNSGAMVTAHFDARVGARVLVTLV 773
           + VVPY T+Y ENRIA+D  +L  +VD+EN    V+P  GA+V A F+A  GARVL+   
Sbjct: 731 YTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTS 790

Query: 774 RPNGATVPFGAVAATD---KQSNIVDEGGVVYLSGIPLEKPVLLHVKWGNNASQQCQAQL 830
           +  G  + FGA+A  D     S I+D+ G +Y++G+P +  +   V+WG    Q C   +
Sbjct: 791 K-QGIPLRFGAIATLDGVQANSGIIDDDGSLYMAGLPAKGTI--SVRWGEAPDQIC--HI 845

Query: 831 NISASTSQVNS 841
           N   +  Q+NS
Sbjct: 846 NYELTEQQINS 856