Pairwise Alignments

Query, 780 a.a., DNA polymerase II from Rahnella sp. WP5

Subject, 786 a.a., DNA polymerase II from Pseudomonas putida KT2440

 Score = 1082 bits (2799), Expect = 0.0
 Identities = 537/781 (68%), Positives = 622/781 (79%), Gaps = 3/781 (0%)

Query: 1   MLTRHWRDTPRGTEVELWLATDEGPQKVRLPLQESVAFIPAEQRAAAERILIDEKNISLR 60
           +LTRHW DTP GT VE WLATD GP+ +RL  QESVAFIP  Q   A  +L +E    L+
Sbjct: 8   VLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLANETGTKLK 67

Query: 61  PLPLQDFHSRAVLGLYCPQHRQLMRIEKLLKENGVSVFEADIRPPERFLMERYITAPVWF 120
           PL L+DF  R +LGLY  QHRQLM++E+ L+  G+ VFEADIRPPER+LMER+ITAPV F
Sbjct: 68  PLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITAPVQF 127

Query: 121 SGKPGPDKLLMDTKMKPAEDYRPPLKLCSLDIETSGNGELYCIGLEGCGQRHVYMLGPPN 180
           +G+P    +  D ++KP   YRP L+L SLDIETS  GELY I LEGCGQR VYMLGP N
Sbjct: 128 TGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQVYMLGPAN 187

Query: 181 GDPNAQFDFNMVYVDSRPQLLEKLNEWLEIYDPDAIIGWSVVQFDLRVLQKHADRYKIPL 240
           GD +   DF++ Y   R  L+ +LN+W+  +DPDAIIGW++VQFDLR+L +HA   ++PL
Sbjct: 188 GDASG-LDFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAKSLQVPL 246

Query: 241 KFGRGGGELEWREHGFKQGHFFAAAAGRLIIDGIEALKSAFWNFNSFSLEFVSQSLLGEG 300
             GR G  +  R H    GH FA A GRL+IDGIEAL+SA W+F SFSLE V+Q+LLGEG
Sbjct: 247 ALGRNGAVMTLRSHA-GGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQTLLGEG 305

Query: 301 KASDNPYQRLAEIEQRFREDKPALARYNLKDCELVTRIFAKTELMPFLLERASVTGLAVD 360
           KA D PYQR+ EI +RF EDKPALARYNLKDCELVTRIFA T L+ FLLERASVTGLAVD
Sbjct: 306 KAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTGLAVD 365

Query: 361 RSGGSVAAFTHLYLPRMHRAGYVAPNMGELQGEMSPGGFVMDSRPGLYDSVLVLDYKSLY 420
           RSGGSVAAF HLY+P+MHR G+VAP++G    E SPGGFVMDSRPGLYDSVLVLDYKSLY
Sbjct: 366 RSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLDYKSLY 425

Query: 421 PSIIRTFLIDPVGLVAGLQQPDDEHSVPGYRNARFSRETHCLPEIVRQIWMGREEAKKQK 480
           PSIIRTFLIDPVGL+ GL+QPDD HSV G+R  RFSR  HCLP IV ++W GRE AK++ 
Sbjct: 426 PSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREAAKREG 485

Query: 481 NKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHDIMRQTRELIEAEGYQVIYG 540
           N PLSQALKIIMNAFYGVLGSSGCRFFDPRLASSIT+RGH IMRQTR LIEA GY VIYG
Sbjct: 486 NAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYDVIYG 545

Query: 541 DTDSTFVWLNKAHSQEDADVIGRHLVERVNVWWKAHLQQEYGLESALELEFETHYQRFLM 600
           DTDSTFVWL  AH++EDA  IGR LV +VN WW+AHL +   L SALEL+FE HY+RFLM
Sbjct: 546 DTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVHYRRFLM 605

Query: 601 PTIRGSETGSKKRYAGLVNDADG-EHIVYKGLETVRTDWTKLAQEFQQELYQRIFHRQPY 659
           PTIRG++ GSKKRYAGLV  ADG E +VYKGLE+VRTDW+ LA++FQQELY R+F  +PY
Sbjct: 606 PTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVFRSEPY 665

Query: 660 QDYVREYVARTLSGEFDDKLVYRKRLRRKLSDYEKNVPPHVRAARLADDYNALHGRAKQY 719
           +DYVREYV RTL+GE D+ LVYRKRLRR L+DY++NVPPHVRAARLADDYN    R  QY
Sbjct: 666 RDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQRPLQY 725

Query: 720 QNGGWISYVMTTSGPEPLENRQSPVDYDHYIERQLEPVADGILPFLHDDFATLITGQMGL 779
           Q GGWISYV+TT+GPEPLEN Q+P+DYDHYI RQL PVAD ILPF+ DDFA L   Q+ L
Sbjct: 726 QRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTDHQLLL 785

Query: 780 F 780
           F
Sbjct: 786 F 786