Pairwise Alignments

Query, 780 a.a., DNA polymerase II from Rahnella sp. WP5

Subject, 783 a.a., DNA polymerase II from Escherichia coli ECRC100

 Score = 1129 bits (2921), Expect = 0.0
 Identities = 550/780 (70%), Positives = 643/780 (82%), Gaps = 3/780 (0%)

Query: 1   MLTRHWRDTPRGTEVELWLATDEGPQKVRLPLQESVAFIPAEQRAAAERILIDEKNISLR 60
           +LTRHWRDTP+GTEV  WLATD GP +V L  QESVAFIPA+Q   A+ IL  E+   L 
Sbjct: 7   ILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILRGEQGFRLT 66

Query: 61  PLPLQDFHSRAVLGLYCPQHRQLMRIEKLLKENGVSVFEADIRPPERFLMERYITAPVWF 120
           PL L+DFH + V GLYC  HRQLM  EK L+E GV+V+EAD+RPPER+LMER+IT+PVW 
Sbjct: 67  PLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWV 126

Query: 121 SGKPGPDKLLMDTKMKPAEDYRPPLKLCSLDIETSGNGELYCIGLEGCGQRHVYMLGPPN 180
            G    +  +++ ++KP  DYRPPLK  S+DIET+ +GELYCIGLEGCGQR VYMLGP N
Sbjct: 127 EGDMH-NGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPEN 185

Query: 181 GDPNAQFDFNMVYVDSRPQLLEKLNEWLEIYDPDAIIGWSVVQFDLRVLQKHADRYKIPL 240
           GD +A  DF + YV SRPQLLEKLN W   YDPD IIGW+VVQFDLR+LQKHA+RY+IPL
Sbjct: 186 GDASA-LDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPL 244

Query: 241 KFGRGGGELEWREHGFKQGHFFAAAAGRLIIDGIEALKSAFWNFNSFSLEFVSQSLLGEG 300
           + GR   ELEWREHGFK G FFA A GRLIIDGIEALKSAFWNF+SFSLE V+Q LLGEG
Sbjct: 245 RLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEG 304

Query: 301 KASDNPYQRLAEIEQRFREDKPALARYNLKDCELVTRIFAKTELMPFLLERASVTGLAVD 360
           K+ DNP+ R+ EI++RF EDKPALA YNLKDCELVT+IF KTE+MPFLLERA+V GL VD
Sbjct: 305 KSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVD 364

Query: 361 RSGGSVAAFTHLYLPRMHRAGYVAPNMGELQGEMSPGGFVMDSRPGLYDSVLVLDYKSLY 420
           R GGSVAAF HLY PRMHRAGYVAPN+GE+    SPGG+VMDSRPGLYDSVLVLDYKSLY
Sbjct: 365 RHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLY 424

Query: 421 PSIIRTFLIDPVGLVAGLQQPDDEHSVPGYRNARFSRETHCLPEIVRQIWMGREEAKKQK 480
           PSIIRTFLIDPVGLV G+ QPD EHS  G+ +A FSRE HCLPEIV  IW GR+EAK+Q 
Sbjct: 425 PSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQG 484

Query: 481 NKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHDIMRQTRELIEAEGYQVIYG 540
           NKPLSQALKIIMNAFYGVLG++ CRFFDPRL SSIT+RGH IMRQT+ LIEA+GY VIYG
Sbjct: 485 NKPLSQALKIIMNAFYGVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYDVIYG 544

Query: 541 DTDSTFVWLNKAHSQEDADVIGRHLVERVNVWWKAHLQQEYGLESALELEFETHYQRFLM 600
           DTDSTFVWL  AHS+E+A  IGR LV+ VNVWW   LQ++  L SALELE+ETH+ RFLM
Sbjct: 545 DTDSTFVWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQQ-LTSALELEYETHFCRFLM 603

Query: 601 PTIRGSETGSKKRYAGLVNDADGEHIVYKGLETVRTDWTKLAQEFQQELYQRIFHRQPYQ 660
           PTIRG++TGSKKRYAGL+ + D + +V+KGLETVRTDWT LAQ+FQQELY RIF  +PYQ
Sbjct: 604 PTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQ 663

Query: 661 DYVREYVARTLSGEFDDKLVYRKRLRRKLSDYEKNVPPHVRAARLADDYNALHGRAKQYQ 720
           +Y RE + + ++GE D +LVYRKRLRR LS+Y++NVPPHVRAARLAD+ N   GR  QYQ
Sbjct: 664 EYFRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQ 723

Query: 721 NGGWISYVMTTSGPEPLENRQSPVDYDHYIERQLEPVADGILPFLHDDFATLITGQMGLF 780
           N G I YV TT+GPEPL+ ++SP+DY+HY+ RQL+PVA+GILPF+ D+FATL+TGQ+GLF
Sbjct: 724 NRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF 783