Pairwise Alignments

Query, 247 a.a., fimbria/pilus periplasmic chaperone from Rahnella sp. WP5

Subject, 236 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 13/196 (6%)

Query: 3   RRNFSVSAMQVLPLLMLAMP---ALCLANITVSPMKVTLNEQHAAALVISSKSETTQYIQ 59
           RR  +++   +  + MLA P   A+ + N+T S      +E    +  + + +++ +  +
Sbjct: 4   RRGVTLTKALLTAVCMLAAPLTQAISVGNLTFS----LPSETDFVSKRVVNNNKSARIYR 59

Query: 60  GKITEVHNPGTPQESETPAPQGAQNSLVVSPLKFGLPAGNSQPVRIVGLG-ESNEEKIYR 118
             I+ + +PG+ +    P        L+ +P +  L AG S+  +    G   N E+ YR
Sbjct: 60  IAISAIDSPGSSELRTRPV----DGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYR 115

Query: 119 VHFQSMTPEEFKNPASNKNFTSELNLTIVWGVVVMVPPAKPVTRLGWDPSTQQITNTGNI 178
           V F+ +        +      S     +V   +++V P +   +  +D  T  ++NTGN 
Sbjct: 116 VSFREVPTRNHTRRSPTGGVVST-EPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNT 174

Query: 179 HLLVQRIGLCDSDKKE 194
              +     CDS ++E
Sbjct: 175 WFKLLIKPGCDSTEEE 190