Pairwise Alignments

Query, 564 a.a., OmpA family protein from Rahnella sp. WP5

Subject, 326 a.a., porin from Pseudomonas simiae WCS417

 Score = 87.8 bits (216), Expect = 6e-22
 Identities = 63/180 (35%), Positives = 88/180 (48%), Gaps = 7/180 (3%)

Query: 371 MIAQQQLRTDAGLLDGWLRSGAPMRMSLGLYQGMRLIAPLETAINSWTPPPPPPPVINQI 430
           + A+  +  D GL +G     A + + +        +AP  T   +  P P P   + Q+
Sbjct: 153 LYARAGVEADYGLDNGKWDYSALVGLGVNFGGNAGAVAPAPTPAPAPEPTPEPEAPVAQV 212

Query: 431 VQGPKTIRLDSLSLFDVGKSELKTSSTKVLINALVGIKAKPGWLIVVAGHTDDTGDDKSN 490
           V+    ++      FD  KS +K +S   + N    +   P   + VAGHTD  G D  N
Sbjct: 213 VRVELDVK------FDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYN 266

Query: 491 QMLSLRRAESVRNWMRDTGDVSESCFAVQGYGESRPVATNDTPEGRAANRRVEISLVPQA 550
           Q LS RRA++V+  +   G V+ S     GYGESRPVA N T  GRA NRRVE S+  QA
Sbjct: 267 QKLSQRRADAVKQVLVKDG-VAPSRITAVGYGESRPVADNATEAGRAVNRRVEASVEAQA 325