Pairwise Alignments

Query, 445 a.a., type VI secretion system baseplate subunit TssK from Rahnella sp. WP5

Subject, 447 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 78/303 (25%), Positives = 121/303 (39%), Gaps = 23/303 (7%)

Query: 8   WSDGAFLAPQQFQQQARWDAFVSDRVAHMALANPWGVIDATFDIGSLALSRLNALRLKVR 67
           W DG  LAPQ FQQQA  +  +    A  A    WGV+    D  +L    +    L+  
Sbjct: 13  WHDGMLLAPQHFQQQALRNERLLTYHAGHARPFHWGVVHFQVDRVNLVSGLVRIRELEAI 72

Query: 68  FPDGTLIDTELADNLPPACDLSAISD---RDSVDVVLALPLLSANGGNLDDGQDSERPRR 124
            PDG ++        P   D+SA +D   +  + + L +P   A+          E  R 
Sbjct: 73  MPDGLIVHHAGDSTEPLEVDISAYADPVGQTQITIHLVIPQALADRA----PGPGEISRF 128

Query: 125 WQQEWVTVQELSGHERTELAIQRYAITLRFAHQEN----SAYLTCPVVRLVRNAQGQWTP 180
              E   V +L+G E   +A  R  + L      N      +++ PV      AQ  +  
Sbjct: 129 LSVEGRPVPDLNGGEEVAIARLRPRLGLFATTGPNQKPPQKFVSMPV------AQATFRN 182

Query: 181 DA----EFIPPMLSLSSSPAVLTELGDLIHRLQARRRRLMAMRRESNERMADFAVADVSL 236
           DA    +F+PP LS++++ A L  LG  I R    +   +A R       A   +AD + 
Sbjct: 183 DAFVLTDFVPPTLSVTANSA-LGRLGGEIVRRVREKALFLAERSGVGTGNAATELADAAR 241

Query: 237 FWLLNALNSAEPVLMELYQSPARHPELFYRELVRLAGSLLTFSLEHKAEDIPLYQHNAPE 296
             + + +    P+  +L      HP   Y  L  LAG L  F+       +  Y H+ P 
Sbjct: 242 TEIRSLVTGLPPLEAQLAVGVC-HPFDVYLSLCTLAGHLSAFANGAVPAKLSRYDHDDPM 300

Query: 297 NVF 299
           + +
Sbjct: 301 SAY 303