Pairwise Alignments

Query, 856 a.a., type VI secretion system ATPase TssH from Rahnella sp. WP5

Subject, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

 Score =  785 bits (2026), Expect = 0.0
 Identities = 421/839 (50%), Positives = 575/839 (68%), Gaps = 26/839 (3%)

Query: 5   LKKIVEKMNVEARECLDAAISLAVSRTHHEVDIEHLLLALVTRQPALIEQLCLNAGLRGD 64
           LK +  K+N  +R   ++A +L +S  H+EV++EHLLL L+    + +  +  +  +  +
Sbjct: 16  LKSLFAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAE 75

Query: 65  ALVDALKVSLNHLRSGNTRSPVLSELLVEHLEKSWLHASACWQQTQLPVQAFLGSLLASE 124
            L   L  +L   + GNTR+P LS  +   +E++WL AS  +   Q+     L +LL   
Sbjct: 76  RLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDA 135

Query: 125 KDNQIHLSSA------------LQQALLCQVDRADRLLHDACAPAQATNHPAATRHNTDS 172
           +  ++ ++SA            L  A L +     R      +PA   +  +     T  
Sbjct: 136 ELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTP- 194

Query: 173 AVMKFTRNLTEQARDAALDPALGREPEIRQLIDVLLRRRQNNPVLTGEPGVGKTALVEGL 232
           A+ ++T NLT+ AR+  +DP LGRE E+RQ++D+L RRRQNNP+LTGE GVGKTA+VEGL
Sbjct: 195 ALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGL 254

Query: 233 AQRIADGTVPEALKSMEILSLDMGLLQAGASVKGEFENRLQTLLREVKEYPSPVILFIDE 292
           A RIA G VP  LK + + +LD+GLLQAGA VKGEFENRL+ ++ EVK    P+ILFIDE
Sbjct: 255 ALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDE 314

Query: 293 AHTLIGAGGQAGQNDAANLLKPALARGEMRVVAATTWAEYKKYFEKDAALARRFQVIKVA 352
           AHTLIG+GGQAGQNDAANLLKPALARGE+R +AATTWAEYKKYFEKDAALARRFQV+KV 
Sbjct: 315 AHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVE 374

Query: 353 EPDEETAIAMLRSLKPALSKHHGVQILESALVAAVRLSSRYISGRQLPDKSISLLDTACA 412
           EPDE+ AI MLR L   + +HH V +++ ALV AVRLS+RYI+GRQLPDK++S+LDTACA
Sbjct: 375 EPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACA 434

Query: 413 RVAISQCHEPKEIEDLNAMISNIHTERESLLKE-GENPSRVKWLDQRESEL---KQSLEA 468
           R+A++Q   P  +ED    I N+  E + L  E G+     + L+  ++ L   +Q  + 
Sbjct: 435 RIALAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAEQQQEQQ 494

Query: 469 LLPVWRQQQQIVAQINSIE-----DVAQIAALRAQLAEMHKDQALVYDCVDATCVADVIA 523
           L   W+Q+ ++V Q+ +++     D  Q+  LRA+LA +  DQ LV+  VD+  +A VI+
Sbjct: 495 LNAQWQQELELVEQLKALDAANDADAQQLNTLRAELARVQGDQPLVHALVDSGAIAQVIS 554

Query: 524 GWTGIPLGRMMEKEQQQLGDLVARLESRVIGQSHALADIAQQIRIGRANLADPVKPTGVF 583
           GWTGIPLG+M+  E   +  L A L  RV+GQ HAL +I ++I+I RA + DP KP GVF
Sbjct: 555 GWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGVF 614

Query: 584 MLAGPSGVGKTETALALSELLFGGEQSLITINMSEYQEAHSVSGLKGSPPGYVGYGQGGV 643
           +L GPSGVGKTETALAL++ L+GGE++LITINMSEYQEAH+VS LKGSPPGYVGYG+GGV
Sbjct: 615 LLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSPPGYVGYGEGGV 674

Query: 644 LTEAVRRRPYSVVLLDEVEKAHPDVMEIFYQVFDKGVMEDAEGQLINFRNTLIILTSNLA 703
           LTEAVRR+PYSVVLLDEVEKAHPDV+E+F+QVFDKGV++D EG+ INFRNT+IILTSN  
Sbjct: 675 LTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNTG 734

Query: 704 SDRVMTAC--AAGNTDQKALTALLRPEFDQYFRPALMGRLQLIPYLPVVGETLAKIIRLK 761
           ++R+M  C  A      +A+   LR + +  F+PA +GRL ++P+ PV  + L +I+ LK
Sbjct: 735 TERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRLSIVPFYPVQDQILERIVALK 794

Query: 762 IDKVCKRFSGAGEGNSSLSYSEKVVEFMASRCQVEQSGAREIDAVLNRELLPLLTDRLL 820
           ++++ KRF  A    + LSY + +V+ +A+RC    SGAR ID +L++ L+P L  R+L
Sbjct: 795 LERIAKRF--ARNHQAELSYDQALVKAIAARCTEVDSGARNIDNILSQTLMPELAQRVL 851