Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 498 a.a., EvpB family type VI secretion protein from Pseudomonas simiae WCS417

 Score =  461 bits (1186), Expect = e-134
 Identities = 239/494 (48%), Positives = 335/494 (67%), Gaps = 11/494 (2%)

Query: 5   QVMNASAQAEQSGDYLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSNDLVGS 64
           Q++ A+ +A +  + L Q         RE+    V++  +  L++      +VSND + S
Sbjct: 11  QILGATEEASEFANLLLQEFKPKTERAREAVETAVRTLAEQALAQTD----LVSNDAIKS 66

Query: 65  IEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQSSVT-ENTKVRVFNCTKKEL 123
           IE+ IAAID  L++QV++II   +FQ++ES+WRGLH LV ++ + E  K+RV N +K +L
Sbjct: 67  IESIIAAIDAKLTAQVNQIIHHQDFQQLESAWRGLHYLVNNTESDEQLKIRVLNISKPDL 126

Query: 124 ---LRDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHV 180
              L+ FK  + +DQS +FK +YE EYG FGG+PY   VGD+ FD  P DV+LL ++S V
Sbjct: 127 HKTLKKFKGTA-WDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGELSKV 185

Query: 181 AAAAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLP 240
            AA H+PF++AA+P +  MGS+ E+  PRDL K+F T +YA W+S R+S+DSRY+GLT+P
Sbjct: 186 CAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMP 245

Query: 241 RVIGRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIR 300
           R + RLPYGAKT  V+AF FEE  D   + + Y W NAAY +A  +  +F+ +GWC+ IR
Sbjct: 246 RFLARLPYGAKTDPVEAFAFEENTD-GADSSKYTWANAAYAMAVNINRSFKHYGWCSRIR 304

Query: 301 GVEGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAF 360
           G+E GG V++LP + + +  G   M+CPTE+AISDRRE ELA+ GF+PL++ K TD+AAF
Sbjct: 305 GIESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAF 364

Query: 361 FAVQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNF 420
              QS  KP +YD   A ANA L+++L Y+  T RFAHYLK IVRDK+GSF  K E Q +
Sbjct: 365 IGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEMQRW 424

Query: 421 LQNWINQYVVGSD-NVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSM 479
           LQ+WI  YV G   +   T KA HPL  A V V +V G+PG Y +  YL+PH+QLEGL++
Sbjct: 425 LQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLEGLTV 484

Query: 480 SLRLVAELPASTGA 493
           SLRLV++LP++  A
Sbjct: 485 SLRLVSKLPSAKSA 498