Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 502 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

 Score =  422 bits (1086), Expect = e-122
 Identities = 208/464 (44%), Positives = 304/464 (65%), Gaps = 5/464 (1%)

Query: 31  RRESDRNKVKSQLDNFLSEVASGAVIVSNDLVGSIEARIAAIDELLSSQVSKIIQAPEFQ 90
           + +  R  V++ +     +     V +SND   S++A I  ID  LS Q+++I+   EFQ
Sbjct: 35  KTDQAREAVENAVKTLAVQALENTVTISNDAYRSVQAIITEIDRKLSEQINQILHHEEFQ 94

Query: 91  RMESSWRGLHKLVQSSVT-ENTKVRVFNCTKKELLRDFK--SASDFDQSSLFKSIYESEY 147
           ++E +WRGLH LV ++ T E  K+RV   +K+E+ R  K      +DQS LFK IYE+EY
Sbjct: 95  QLEGAWRGLHYLVNNTETDEQLKIRVMCASKREVARSLKRHKGIGWDQSPLFKKIYEAEY 154

Query: 148 GTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHVAAAAHAPFLSAANPGMFAMGSFSEMPR 207
           G FGG+P+ A +GDF FD  P DV++L +++ +AAAAH PF++ A+P +  M S+ E+  
Sbjct: 155 GQFGGEPFGALIGDFHFDHSPPDVEMLGEMAKIAAAAHCPFIAGASPTVMQMDSWQELSN 214

Query: 208 PRDLGKLFETSDYARWKSFRQSDDSRYVGLTLPRVIGRLPYGAKTVSVDAFNFEEKIDEN 267
           PRDL K+F+ +++  W+S R S+D+RY+GL +PR + RLPYGA+T  VD F FEE+ D  
Sbjct: 215 PRDLTKIFQNTEHTAWRSLRDSEDARYIGLAMPRFLARLPYGARTNPVDEFEFEEETDSA 274

Query: 268 NEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIRGVEGGGLVKSLPTYNYISQTGEKVMQC 327
                Y W N+AY +   +  +F+++GWC +IRGVE GG V++LPT+ + +  G   M+C
Sbjct: 275 AHNR-YTWANSAYAMGVNINRSFKQYGWCTSIRGVESGGAVENLPTHTFPTDDGGVDMKC 333

Query: 328 PTEVAISDRREKELAELGFIPLIYCKGTDYAAFFAVQSTNKPRKYDSELANANAKLSSQL 387
           PTE+AISDRRE ELA+ GF+PL++ K +D+AAF   QS   P +Y    A ANA L+++L
Sbjct: 334 PTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQLPAEYYDADATANANLAARL 393

Query: 388 QYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNFLQNWINQYVVGSDNV-GPTIKASHPLR 446
            Y+    RFAHYLK IVRDK+GSF  + + + +L +WI  YV GS        KA  PL 
Sbjct: 394 PYLFACCRFAHYLKCIVRDKIGSFREREDMERWLNDWIMNYVDGSPGTSSQDTKAMKPLA 453

Query: 447 EAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSMSLRLVAELPAS 490
            A V+V  +  +PG Y A  +L+PH+QLEGL++SLRLV++LP++
Sbjct: 454 AAEVQVEAIEDNPGYYAAKFFLRPHYQLEGLTVSLRLVSKLPSN 497