Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 502 a.a., Uncharacterized protein ImpC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  424 bits (1090), Expect = e-123
 Identities = 227/495 (45%), Positives = 314/495 (63%), Gaps = 9/495 (1%)

Query: 2   SDIQVMNASAQ--AEQSGDYLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSN 59
           S++Q  +A AQ  A  SG++ D +++     +       V++ +     +  +  + VS+
Sbjct: 4   SNMQATDAVAQDTASASGEF-DALLNQAFRPKTTQAAKAVEAAVQTLAQQALANTITVSD 62

Query: 60  DLVGSIEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQSSVT-ENTKVRVFNC 118
           D   SI A IA ID  L+ Q+  I+Q P++Q++ESSWRG+  LV ++ T E  K+R  N 
Sbjct: 63  DAYKSISAIIAQIDFKLTEQIKLILQHPDWQKLESSWRGMEHLVYNTETDEKLKIRFMNL 122

Query: 119 TKKELLRDFKSASD--FDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQ 176
           +K EL R+ K      +DQS +FK +YE+EYG  GG+PY   + D+ FD  P DV LL  
Sbjct: 123 SKDELRRNMKRYKGIAWDQSPMFKKLYEAEYGQLGGEPYGCIIADYYFDHTPPDVDLLGS 182

Query: 177 ISHVAAAAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLF-ETSDYARWKSFRQSDDSRYV 235
           I+ VAA+AHAPF++ A+P +  M S+ E+  PRDL K+  +  +YA W S R S+DSRY+
Sbjct: 183 IAKVAASAHAPFIAGASPSVLQMDSWQELANPRDLTKIVTQNLEYAPWNSLRASEDSRYI 242

Query: 236 GLTLPRVIGRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGW 295
           GLT+PR + RLPYGAKT  VD F+FEE  D  ++   Y+W NAAY +   +  +F+ +GW
Sbjct: 243 GLTMPRFLARLPYGAKTNPVDEFDFEEDAD-GSDHTKYVWSNAAYAMGVNINRSFKHYGW 301

Query: 296 CAAIRGVEGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGT 355
           C  IRGVE GG V++LP + + +  G   M+CPTE+AISDRRE ELA+ GFIPLI+ K +
Sbjct: 302 CTLIRGVESGGAVENLPCHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKNS 361

Query: 356 DYAAFFAVQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKS 415
           DYAAF   QS  KP++Y    A ANA LS++L Y+   SRFAH+LK IVRDK+GSF  + 
Sbjct: 362 DYAAFIGAQSLQKPQEYYDPDATANANLSARLPYLFACSRFAHFLKCIVRDKIGSFKERE 421

Query: 416 ECQNFLQNWINQYVVGSD-NVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQL 474
           + Q +L  WI  YV     N     KA  PL  A V V +V G+PG Y A  +L+PHFQL
Sbjct: 422 DMQRWLNEWIMNYVDADPVNSSQETKARRPLAAAEVVVEEVEGNPGYYDAKFFLRPHFQL 481

Query: 475 EGLSMSLRLVAELPA 489
           EGL+ SLRLV +LP+
Sbjct: 482 EGLTGSLRLVTKLPS 496