Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 499 a.a., type VI secretion system contractile sheath large subunit from Erwinia amylovora T8

 Score =  436 bits (1121), Expect = e-127
 Identities = 224/493 (45%), Positives = 321/493 (65%), Gaps = 14/493 (2%)

Query: 10  SAQAEQSGDYLDQIIDN-------TQAIRRESD--RNKVKSQLDNFLSEVASGAVIVSND 60
           S Q +QSGD   Q            +  R +SD  R  V+S +     +     V VSND
Sbjct: 2   SNQFQQSGDLQQQAYSEDAFSALLNKEFRPKSDQARAAVESAVKTLAQQALENTVTVSND 61

Query: 61  LVGSIEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQSSVT-ENTKVRVFNCT 119
              +I+A IA IDE LS QV++II   +FQ++E +WRGL  LV ++ T E  K+R  + +
Sbjct: 62  AYRTIQALIAEIDEKLSLQVNQIIHHEDFQQLEGAWRGLSYLVNNTETDEMLKIRFMSIS 121

Query: 120 KKELLRDFK--SASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQI 177
           K+EL R  K      +DQS +FK IYE EYG FGG+P+   VGD+ FD  P+DV+LL ++
Sbjct: 122 KQELGRTLKRYKGVSWDQSPIFKKIYEEEYGQFGGEPFGCLVGDYYFDHSPQDVELLSEM 181

Query: 178 SHVAAAAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGL 237
           + + +AAH PF++   PG+  M S+ E+  PRDL K+F+ ++YA W+S R+S+D+RY+GL
Sbjct: 182 ARIGSAAHCPFITGTAPGVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLGL 241

Query: 238 TLPRVIGRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCA 297
            +PR + RLPYG +T  VD+F+FEE+ D  N G +Y W NAAY +A  +  +F++ GWC 
Sbjct: 242 VMPRFLSRLPYGIRTNPVDSFDFEEQTDGANHG-NYTWTNAAYAMAANINRSFKDFGWCT 300

Query: 298 AIRGVEGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDY 357
           +IRGVE GG V++LP + + S  G   M+CPTE+AISDRRE ELA+ GF+PL++ K +D+
Sbjct: 301 SIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDF 360

Query: 358 AAFFAVQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSEC 417
           AAF   QS  KP +Y    A ANA+L+++L Y+    RFAHYLK IVRDK+GSF  + E 
Sbjct: 361 AAFIGAQSLQKPAEYHDADATANARLAARLPYLFACCRFAHYLKCIVRDKIGSFRERDEM 420

Query: 418 QNFLQNWINQYVVG-SDNVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEG 476
           + +L +W+  YV G + N     K+  PL  A V+V ++  +PG Y A  +L+PH+QLEG
Sbjct: 421 ERWLNDWVMNYVDGDTANSSQETKSRKPLASAEVQVQEIEDNPGYYAAKFFLRPHYQLEG 480

Query: 477 LSMSLRLVAELPA 489
           L++SLRLV++LP+
Sbjct: 481 LTVSLRLVSKLPS 493