Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 463 a.a., type VI secretion system contractile sheath large subunit from Escherichia coli ECRC100

 Score =  334 bits (856), Expect = 4e-96
 Identities = 179/458 (39%), Positives = 266/458 (58%), Gaps = 4/458 (0%)

Query: 6   VMNASAQAEQSGDYLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSNDLVGSI 65
           V + + Q EQ    LDQI+  T+        +  +  +  F++ +             ++
Sbjct: 9   VSSHAGQPEQESSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASAEPVNKLAV 68

Query: 66  EARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQS-SVTENTKVRVFNCTKKELL 124
           ++ IA IDE +S Q+  II AP FQ++ES WR L  +V      EN KV V + TK+ELL
Sbjct: 69  DSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVLHVTKQELL 128

Query: 125 RDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHVAAAA 184
            DF+ A +  QS  +K +Y S +G FGG+P +A +G +EF     D++LL+ +S V A A
Sbjct: 129 EDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQYVSAVGAMA 188

Query: 185 HAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLPRVIG 244
           HAPFLS+ +P    + S++E+P  +DL  +FE   Y +W++ R S+DSRY+GLT PR + 
Sbjct: 189 HAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLGLTAPRFLL 248

Query: 245 RLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIRGVEG 304
           R PY      V  FN+ E + +N+E   YLW N A+ LA  + ++F ++ WC  I G + 
Sbjct: 249 RQPYSPTDNPVKNFNYYEDVSQNHE--DYLWGNTAWMLACNIADSFAKYRWCPNIIGPQS 306

Query: 305 GGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAFFAVQ 364
           GG VK LP + +    G+   + PTEV ++DRRE ELAE GFI L   K +D AAFF+  
Sbjct: 307 GGAVKDLPVHLF-ETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAAFFSAN 365

Query: 365 STNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNFLQNW 424
           S  KP+ +  + A  N KL +QL Y+   +R AHY+K + R+++GS+  +S+ +  L  W
Sbjct: 366 SVQKPKHFPGKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLERELNTW 425

Query: 425 INQYVVGSDNVGPTIKASHPLREAVVEVVDVPGSPGSY 462
           I QYV   +N    +++  PLR A VEV+DV G PG Y
Sbjct: 426 IRQYVADQENPPADVRSRKPLRAAKVEVMDVEGEPGWY 463