Pairwise Alignments

Query, 493 a.a., type VI secretion system contractile sheath large subunit from Rahnella sp. WP5

Subject, 512 a.a., hypothetical protein from Escherichia fergusonii Becca

 Score =  358 bits (919), Expect = e-103
 Identities = 184/465 (39%), Positives = 282/465 (60%), Gaps = 5/465 (1%)

Query: 26  NTQAIRRESDRNKVKSQLDNFLSEVA-SGAVIVSNDLVGSIEARIAAIDELLSSQVSKII 84
           N++ +   S   +V + +   LS +A SG  +V  D    ++  I  +D+ +S Q+  ++
Sbjct: 47  NSETLADASPDERVTAAIHVLLSCLAKSGEDVVKLDK-SLLDFHIDDLDQKISKQLDAVM 105

Query: 85  QAPEFQRMESSWRGLHKLVQ-SSVTENTKVRVFNCTKKELLRDFKSASDFDQSSLFKSIY 143
             PEFQ++ES WRG   +VQ +   +N ++ + + +K+ L +DF  + +  QS L++  Y
Sbjct: 106 HHPEFQKVESLWRGTWFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGLYRHTY 165

Query: 144 ESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHVAAAAHAPFLSAANPGMFAMGSFS 203
             EY T GG+P ++ +  +EFD  P+D+ LL  IS V+AA+H PF+ +  P  F   S  
Sbjct: 166 IQEYDTPGGEPVASLISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKFFLKNSME 225

Query: 204 EMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLPRVIGRLPYGAKTVSVDAFNFEEK 263
           E+   +D+G  F+ ++Y +WKSFR +DDSRYVGL +PRV+GRLPYG  TV V +FN+ E+
Sbjct: 226 EVAAIKDIGNYFDRAEYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVPVRSFNYVEE 285

Query: 264 IDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIRGVEGGGLVKSLPTYNYISQTGEK 323
           + +  +   YLW NA++  A  MV++F  +GWC  IRG + GG V  LP + Y   TG +
Sbjct: 286 V-KGPDHEKYLWTNASFAFAANMVKSFVNNGWCVQIRGPQAGGAVADLPIHLYDLGTGNQ 344

Query: 324 VMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAFFAVQSTNKPRKYDSELANANAKL 383
           V + P+EV I + RE E A LGFIPL Y K  DYA FF+  S  KP  YD+  A AN+++
Sbjct: 345 V-KIPSEVMIPETREFEFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRI 403

Query: 384 SSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNFLQNWINQYVVGSDNVGPTIKASH 443
           +++L YI   SR AHYLK I R+ +G+   +   +  L  WI   V    + G  ++ASH
Sbjct: 404 NARLPYIFLLSRIAHYLKIIQRENIGTTKDRRVLELELNTWIRTLVTEMTDPGDELQASH 463

Query: 444 PLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSMSLRLVAELP 488
           PLR+  V V D+  +PG +R   +  PHFQ+EG+ ++L LV+++P
Sbjct: 464 PLRDGKVIVEDIEDNPGFFRVRLFAVPHFQIEGMDINLSLVSQMP 508