Pairwise Alignments

Query, 368 a.a., ABC transporter permease from Rahnella sp. WP5

Subject, 368 a.a., putative multidrug ABC transporter permease YbhR from Escherichia coli ECOR38

 Score =  640 bits (1652), Expect = 0.0
 Identities = 321/367 (87%), Positives = 343/367 (93%)

Query: 1   MYHRLWTLIRKELQSLLREPQTRTILILPVVLQVILFPFAATLEVTNATIAIYNQDNGSH 60
           M+HRLWTLIRKELQSLLREPQTR ILILPV++QVILFPFAATLEVTNATIAIY++DNG H
Sbjct: 1   MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEH 60

Query: 61  SVELTQRFAHAKAFSHLLLLKSPQEIQPTLDKQKALLLIRFPADFSRNLASNQPAKLQII 120
           SVELTQRFA A AF+H+LLLKSPQEI+PT+D QKALLL+RFPADFSR L + Q A LQ+I
Sbjct: 61  SVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLI 120

Query: 121 LDGRNSNSAQIAANYLQQIVKNYQLELMTGQPKSNNSELVIRNWYNPNLNYKWFVVPSLI 180
           LDGRNSNSAQIAANYLQQIVKNYQLEL+ G+PK NNSELV+RNWYNPNL+YKWFVVPSLI
Sbjct: 121 LDGRNSNSAQIAANYLQQIVKNYQLELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI 180

Query: 181 AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPAQIVAIAQATIVLGV 240
           AMITTIGVMIVTSLSVAREREQGTLDQLLVSPL TWQIF+GKAVPA IVA  QATIVL +
Sbjct: 181 AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAI 240

Query: 241 GIWGYQIPFSGSVLLFYFTMLIYGLSLVGFGLLISALSSTQQQAFIGVFVFMMPAILLSG 300
           GIW YQIPF+GS+ LFYFTM+IYGLSLVGFGLLIS+L STQQQAFIGVFVFMMPAILLSG
Sbjct: 241 GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSG 300

Query: 301 YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWGSLWPLLVIAAITGSAAY 360
           YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVW SLWPLLVI A TGSAAY
Sbjct: 301 YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAY 360

Query: 361 WMFRRKV 367
            MFRRKV
Sbjct: 361 AMFRRKV 367