Pairwise Alignments

Query, 562 a.a., sensor histidine kinase from Rahnella sp. WP5

Subject, 565 a.a., sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system from Escherichia coli BL21

 Score =  233 bits (595), Expect = 1e-65
 Identities = 166/573 (28%), Positives = 292/573 (50%), Gaps = 36/573 (6%)

Query: 4   FNLILLLLQQMCVFLVIAWLMSKTRLFIPLVQVSVRLPHKLLCYIT-FSIFCIMGTYFGL 62
           FN++L +  +  + L+  + + + RLF  L+  S   P +LL     FS+F +  T+ G+
Sbjct: 5   FNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGV 64

Query: 63  HIEDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGIHRY--SMGGMTALSCMISTIAEGLL 120
            +E S+ N R I  + GG+L GP VG + G+  GIHRY   +GG+TA+ C I++I  G +
Sbjct: 65  PVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCI 124

Query: 121 GGLVHSVLIKRGRIDKLFNPLVAAGVTFVAEILQMLIILLIARPFHDALNLVGSIAAPMM 180
            G ++  + K  R    +   +  G+  + E L M+++++ A      +++V  I  PM+
Sbjct: 125 SGWINLKIPKAQR----WRVGILGGM--LCETLTMILVIVWAPTTALGIDIVSKIGIPMI 178

Query: 181 VTNTLGAAMFMRILLDKRAMFEKYTSAF--SATALKVAASTEGILRRGFNEENSMKVAQV 238
           + +     +   +LL +    EK  SA   +  AL +A  T  + R   N E+  KV ++
Sbjct: 179 LGSV---CIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRH-VNSESLRKVCEI 234

Query: 239 LLKELDIGAVAITDREKLLAFTGIGDDHHLVGKPISSQYTWRAIENDEVVYADGNEMPYR 298
           +  ++   AVAIT+ + +LA+ G+G+ ++  G    S  T +A+   +++  + +E    
Sbjct: 235 IRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEA--- 291

Query: 299 CSLHPSCKLGSTLVIPLRGENQRVIGTIKLYEVRNRLFSSINRTLGEGIAQLLSAQILAG 358
              H + ++ S LVIPL  E   V GT+K+Y       +S  + +  G++Q++S Q+   
Sbjct: 292 ---HRTPEIHSMLVIPL-WEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVS 347

Query: 359 KFEQQKALLAQSEIKLLHAQVNPHFLFNALNTLMAVIRHDSDKAGQLVQYLSTFFRKNLK 418
           + EQ + +  ++E++ L +++NPHFLFNALN + + IR + D A QL+  LS + R N++
Sbjct: 348 RAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIE 407

Query: 419 -RSSEVVTLADELEHVNAYLQIELARFPSQLKVDLQVPEAFSDQSLPAFTLQPLVENAIK 477
            +  E + +  EL  +  Y+ IE ARF  +L V   + E   +  +P+  +QPLVENAI 
Sbjct: 408 LKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEV-NCCIPSLLIQPLVENAIV 466

Query: 478 HGTSQLLSNGNIVIRAYSEGEMVIIEVEDNAGLYQP---------EESSDGLGMSLVDKR 528
           HG       G + I     G  V I V D      P         E   + +G+  V  R
Sbjct: 467 HGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHR 526

Query: 529 LRARFGDDYGITVSCKPDDFTRVTLRLPAEGAP 561
           ++  +G+   I    + +  T +   +P +  P
Sbjct: 527 VKLLYGEGLHIR---RLEPGTEIAFYIPNQRTP 556