Pairwise Alignments

Query, 324 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 174 a.a., shikimate kinase II from Escherichia coli BL21

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 4/146 (2%)

Query: 145 LIGLRGAGKSTLGKMLADSIGWSFVELNREIERQNGLSVSEIIALYGQEGFRRMEQTALS 204
           LIG RG GK+T+G  LADS+   FV+ ++ ++ Q  ++V+EI+      GFR  E  AL 
Sbjct: 7   LIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALE 66

Query: 205 RLLARKEPIVLATGGGIVSEPITFDQILTSFYTIWLKAEPEEHMSRVRG--QGDLRPMAD 262
            + A     V+ATGGGI+        +  +   ++L A     ++R++   + DLRP   
Sbjct: 67  AVTA--PSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLT 124

Query: 263 DRAAMQELRTILQSREPLYARAAGVL 288
            +   +E++ +L+ R+ LY   A ++
Sbjct: 125 GKPLSEEVQEVLEERDALYREVAHII 150