Pairwise Alignments

Query, 352 a.a., polysaccharide deacetylase family protein from Rhodopseudomonas palustris CGA009

Subject, 747 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  179 bits (455), Expect = 2e-49
 Identities = 107/334 (32%), Positives = 162/334 (48%), Gaps = 3/334 (0%)

Query: 5   RHNIIRAGLEALYYTGAHRVLRPIFSGIGTIFMLHSVRPARDDS-FQPNRHLEVTPDFLR 63
           ++  IR GLE            P  +G G IF LH VRP +  S F PN  L VTP FL 
Sbjct: 410 KYGAIRVGLEVSSLPPVRSAF-PSLAGRGVIFTLHHVRPGQAVSAFAPNVQLSVTPQFLE 468

Query: 64  ATLRHLRELGIDLVPMDELHRRLRARDFSRRFACITLDDGYRDNRDFALPVFEEFGAPFT 123
             ++   E G+  V + +L   L      R F   TLDDGYR+N + A P+F ++  P+T
Sbjct: 469 EAIKAALESGLVPVHLHDLPALLADTSEVRSFCAFTLDDGYRNNAEHAAPIFRKYAVPYT 528

Query: 124 VFVTSDFAEGTGRLWWVTLERLIAAQSRLDVSIEGQELRLDIATPEAKQAAFDRLHDLLR 183
           +F+T  F E +  +WW T   L    +  +        +++ ATP  K  AF RL + ++
Sbjct: 529 IFITPGFVERSRSVWWETAAALTKKVTSFEFDFGAGPEQVECATPSQKVEAFARLENFVQ 588

Query: 184 SLPNGGDLDAAMTALCLRYGVDETAAARELCLPWNELRNFAAHPLVTIGAHGITHCMLRR 243
             P    ++  +  +  ++G+D  A   +L +   ELR  +  PLV  GAH +TH  +R+
Sbjct: 589 ESPEDEAVE-RIDRVARQHGIDPIAIVDDLVMDAAELRTLSNDPLVHFGAHTMTHVNMRK 647

Query: 244 QTELVAAHELTGSRARIQDELQRPVDHLAYPYGDRASAGPREFAIAQAVGYKTAVTTRPG 303
                  HE+  S  R++  + +     +YPYG   + G RE       G+  AVTT+ G
Sbjct: 648 IDATRLVHEIEESTRRVEAYVGQRPQSFSYPYGWVRAVGEREAKAVSEAGFSVAVTTQAG 707

Query: 304 MMFADCADHLTALPRISLNGHYQDDRLLPVLTSG 337
           ++     +    LPR+SLNG +Q  R +  L SG
Sbjct: 708 VLGPHSLEKPAQLPRVSLNGRFQKKRFVKALISG 741