Pairwise Alignments

Query, 597 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  165 bits (417), Expect = 2e-45
 Identities = 88/237 (37%), Positives = 142/237 (59%)

Query: 349 GVVVAVLILPIVVVMVISFSSASYLTFPPPGFSLRWYEQFFSDTNWMRAFWTSALIALVS 408
           GVVV  ++ P+VVV +++F+  + L+ P  GFSLRW+   F   ++++AF+ S ++A  +
Sbjct: 13  GVVVLFMMAPLVVVCLVAFTPENTLSLPTSGFSLRWFRAVFERADFIQAFYNSLILAFTA 72

Query: 409 AVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPIIVPPVVLGLSLYTLFLKFDLIGSVFG 468
           A +A  +   AAL I R    G++    L +SPII+P +VLG+++  LF    + GS   
Sbjct: 73  ATLATLIAVPAALAISRYTFPGRNFFSALFLSPIIIPHLVLGVAMLRLFALMGVNGSFTW 132

Query: 469 LAAAHAIGGLPIVVVILAAALQGVDKRLEQAAAVHGASSLTVLRLVTLPAIAPGLAAATF 528
           L  AH +   P V+ ++ AA  G+D+  EQAA   GAS  T+ R +TLP I PG+A    
Sbjct: 133 LMLAHVVIITPYVLRLVLAAAIGIDRSAEQAAESLGASRFTLFRQITLPMILPGVAGGWL 192

Query: 529 FAFLHSFDELVLTLFLSSAQLKTLPLMLWGDINYRLNPVLAVVSTLEVLLVVGGLFL 585
            AF++SFDE+ L++F+SS   +TLP+ ++      ++P++A VS L + L    + L
Sbjct: 193 LAFINSFDEVTLSIFVSSPATQTLPVRMYVYATESIDPMMAAVSALVIALTAATMIL 249



 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 18/236 (7%)

Query: 58  LTYFQRVFAVPLYWESLVRTMQISVTVAFLCLLFGYPTALLIHRTQGLTRALIATAIVLP 117
           L +F+ VF    + ++   ++ ++ T A L  L   P AL I R     R   +   + P
Sbjct: 46  LRWFRAVFERADFIQAFYNSLILAFTAATLATLIAVPAALAISRYTFPGRNFFSALFLSP 105

Query: 118 YFIAILIRTYAWMVLLGRTGPVNKLLVAIGILGEPVQLLFHRGTVLLGMTAVLLPLMVLT 177
             I  L+   A +          +L   +G+ G    L+       L    ++ P ++  
Sbjct: 106 IIIPHLVLGVAML----------RLFALMGVNGSFTWLM-------LAHVVIITPYVLRL 148

Query: 178 IYSSVSRLDPGLTRAALASGAGPIAVFWRVLLPLTLPGIGAGFLLVFVAAIGFFITPTLL 237
           + ++   +D    +AA + GA    +F ++ LP+ LPG+  G+LL F+ +         +
Sbjct: 149 VLAAAIGIDRSAEQAAESLGASRFTLFRQITLPMILPGVAGGWLLAFINSFDEVTLSIFV 208

Query: 238 GGPGDQMFAMHITQQADSVTSEGFLQALGVVLLLITLAVVAIAGRFLGLEFIWGGR 293
             P  Q   + +   A + + +  + A+  +++ +T A + +  R  GL+ +  G+
Sbjct: 209 SSPATQTLPVRMYVYA-TESIDPMMAAVSALVIALTAATMILLDRVYGLDRVLVGK 263