Pairwise Alignments

Query, 597 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  206 bits (525), Expect = 8e-58
 Identities = 100/239 (41%), Positives = 155/239 (64%)

Query: 342 WTVRVMGGVVVAVLILPIVVVMVISFSSASYLTFPPPGFSLRWYEQFFSDTNWMRAFWTS 401
           +++R++ G+++  LILP++V++ +SF+S S+L +P  GFSL+WY+ FF    WMRA   S
Sbjct: 15  YSLRILCGLILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRALKNS 74

Query: 402 ALIALVSAVIAVGLGTCAALGIVRGDIRGKSAIMLLLVSPIIVPPVVLGLSLYTLFLKFD 461
            ++A  + V+A+  GT AA+G+ RGD  GKS +M L++SP++VP V++G++ Y  F    
Sbjct: 75  IIVAPAATVLAMVFGTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFFAPLG 134

Query: 462 LIGSVFGLAAAHAIGGLPIVVVILAAALQGVDKRLEQAAAVHGASSLTVLRLVTLPAIAP 521
           +  S   L   HA+ G+P V++ ++A LQG +  L +AAA  GAS L   R VTLP IAP
Sbjct: 135 MGNSFTSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTLPLIAP 194

Query: 522 GLAAATFFAFLHSFDELVLTLFLSSAQLKTLPLMLWGDINYRLNPVLAVVSTLEVLLVV 580
           G+ +   FAF  SFDE+V+TLFL+  +  TLP  ++  I   L+P +A  +TL +   V
Sbjct: 195 GVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSV 253



 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 37/251 (14%)

Query: 41  LLPLIDLIRISISGPSWLTYFQRVFAVPLYWESL-----VRTMQISVTVA----FLCLLF 91
           +LP++ ++ +S +  S+L Y  + F++  Y +       +R ++ S+ VA     L ++F
Sbjct: 29  ILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRALKNSIIVAPAATVLAMVF 88

Query: 92  GYPTALLIHRTQGLTRALIATAIVLPYFIAILI---RTYAWMVLLGRTGPVNKLLVAIGI 148
           G   A+ + R     ++L+   ++ P  + ++I    +Y +   LG       L++   +
Sbjct: 89  GTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFFAPLGMGNSFTSLILVHAV 148

Query: 149 LGEPVQLLFHRGTVLLGMTAVLLPLMVLTIYSSVSRLDPGLTRAALASGAGPIAVFWRVL 208
           LG                    +P +++T+ +++   +  L RAA + GA P+  F RV 
Sbjct: 149 LG--------------------VPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVT 188

Query: 209 LPLTLPGIGAGFLLVFVAAIGFFITPTLLGGPGD-----QMFAMHITQQADSVTSEGFLQ 263
           LPL  PG+ +G L  F  +    +    L GP       QMF+      + ++ +   L 
Sbjct: 189 LPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLL 248

Query: 264 ALGVVLLLITL 274
               VLLL+TL
Sbjct: 249 IAFSVLLLLTL 259