Pairwise Alignments

Query, 334 a.a., HWE histidine kinase domain-containing protein from Rhodopseudomonas palustris CGA009

Subject, 350 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  114 bits (286), Expect = 3e-30
 Identities = 84/271 (30%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 71  PDLRRLLLEVIPKAAAVINYQVDHVFPGLGPRTMLLTARTLVHPDNASHSMLLSIVDATD 130
           PD   + + V+ + AA +    D +        +L   R +   + A+   L  +V    
Sbjct: 80  PDWSEIPIIVLLEKAAPVQDIRDRLQAAWPKSRLLFHLRPIAPLELANAVQLNLLVRLRQ 139

Query: 131 RFRRDAA---RDLLLGEMRHRMKNLFGVVQSLARQTTTEGRTAEQYRDDFLGRFGALMEA 187
           R  RD+    R+L L E+ HR+KN+   V S+ + T     + E+   DF  R  AL   
Sbjct: 140 RQVRDSIERERELRL-ELNHRVKNILATVTSIFQMTRRGAASVEELAGDFGARLQALSGV 198

Query: 188 EDLAFVTQ-DETALLKLLQRILAPYKGGPAAIAIESGPAVVLAPRSLGSLSLILHELATN 246
               F    +E  L  ++   +APY G  ++    SGP +V++  +  +++L +HEL TN
Sbjct: 199 HSAVFEAGGEEVGLSLIMATTVAPYNGDGSSRIAVSGPDIVVSRDAGTTIALCVHELTTN 258

Query: 247 AAKYGALSVAGGRLRATWAV-DASGRELRLTWVESGGPAVAPPTSTGYGTELIRSVTSYS 305
           A KYGALSV  G +   W V D +     + W+E GGP    P+  GYGT  IRS     
Sbjct: 259 AIKYGALSVPEGNVEVIWEVTDGNDPLFSMNWIERGGPPAVTPSRQGYGTRYIRSALGSL 318

Query: 306 LGGRSELDYAVGGLRAEIIIP---LRSEALP 333
           LG   +L +   G R  I  P   LR+E  P
Sbjct: 319 LGTAPQLQFDTQGFRCRIAGPVSQLRTERQP 349