Pairwise Alignments

Query, 454 a.a., proton-conducting transporter membrane subunit from Rhodopseudomonas palustris CGA009

Subject, 487 a.a., NADH:ubiquinone oxidoreductase subunit N from Pseudomonas simiae WCS417

 Score =  242 bits (617), Expect = 2e-68
 Identities = 169/482 (35%), Positives = 250/482 (51%), Gaps = 40/482 (8%)

Query: 2   TAAQFAALSPLVVLAIAAVAAMMLVPLARLQ---IVQASAAAGLAIAAALVLLRIGAPAA 58
           T   F AL+PL++ ++  V  M+ +   R      + + A   LA+ + +  L++ AP A
Sbjct: 4   TIQHFIALAPLLITSLTIVVVMLAIAWRRNHSQTFLLSCAGLNLALLSIIPALKV-APLA 62

Query: 59  PMGALFTDDGPARFGIVFACLVSLGALVFLR----------TGHPA--KEAPSLLVLVAI 106
               +  DD    F +++  L+ +  L  +           TG+P   +E   L++L A 
Sbjct: 63  VTPLMMVDD----FALLYIALILVATLACVTLAHAYLGEGGTGYPGNREELYLLILLAAA 118

Query: 107 GAATLAGAGHAATLFLGIEILSLSLIALFAFRL-TRQGLEAAYKFLVMSGLASSALLLGI 165
           G   L  A H A LF+G+E+LS+    L A+    ++ LEA  K++V+S   S+ LL G+
Sbjct: 119 GGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGM 178

Query: 166 ALIFAETGALDFAGWGGRGALTAF-------GTALLLAGLAFKFSLVPFHMWTPDAFEAA 218
           AL++AE G L F G G   A T+        G A++L GLAFK SLVPFH+WTPD +E A
Sbjct: 179 ALLYAEAGNLSFTGIGHALAATSMPAPVAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGA 238

Query: 219 PASAATLAGVVSKSAVAIVILRL-ALTAHLPEPVWSQGLAALGGASVLIGNLLALRQPQL 277
           PA  A      SK AV  V++RL  ++      V S  L  +  AS+L GNLLAL Q  L
Sbjct: 239 PAPVAAFLATASKVAVFAVMVRLFQISPAANTGVLSTVLTVIAIASILFGNLLALTQNNL 298

Query: 278 PRMLGYSTIAHSGYIALIIASGTPHAGEAVLFYLAIYAPAMLGA-----LCVSAALGR-A 331
            R+LGYS+IAH GY+ + + +    A EA+  YL  Y    LGA     L  S   GR A
Sbjct: 299 KRLLGYSSIAHFGYLLIALVASKGLAVEAMGVYLVTYVITSLGAFGVITLMSSPFKGRDA 358

Query: 332 PTLPDLHGLMKRRPLEAIALSLSLLSLAGLPAAGGFIAKLFLLRVLIDGSLWVLVGIVVA 391
             L +  GL  RRP     L++ +LSLAG+P   GFI K +++   ++   W LV  +V 
Sbjct: 359 DALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIVATGVEAHEWWLVASLVL 418

Query: 392 GSSLGFFYYAKFFTAPFVGHTH----DESEPLPQLDRGLLIVCIALIVIF-GVAPAGLMN 446
           GS++G FYY +     ++   +    D      Q   G++++ IAL+  F GV P  L+ 
Sbjct: 419 GSAIGVFYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLT 478

Query: 447 VV 448
           +V
Sbjct: 479 LV 480