Pairwise Alignments

Query, 454 a.a., proton-conducting transporter membrane subunit from Rhodopseudomonas palustris CGA009

Subject, 502 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  190 bits (482), Expect = 1e-52
 Identities = 147/486 (30%), Positives = 226/486 (46%), Gaps = 46/486 (9%)

Query: 7   AALSPLVVLAIAAVAAMMLVPLARLQIVQASAAAGLAIAAALVLLRIGAPAAPMGALFTD 66
           A +  LV LA+      +   L  L +   +   GLA +A       G      G +   
Sbjct: 20  ACVIALVDLAVKTPLRGVTYGLTLLTLGAVAVLQGLAASA-------GNTVYGFGGMIVS 72

Query: 67  DGPARFGIVFACLVSLGALVFLRTGHPAK------EAPSLLVLVAIGAATLAGAGHAATL 120
           D    +   FA +  +   V+ R     +      E  SL +   +G   +  + H   +
Sbjct: 73  DPMGNWLKCFASIAMMVTFVYGRAYSGQRDMLRGGELFSLGMFALLGMFVMISSHHFLVI 132

Query: 121 FLGIEILSLSLIALFAFRLTR-QGLEAAYKFLVMSGLASSALLLGIALIFAETGALDF-- 177
           +LG+E+L+LS  AL A R    +  EAA K+ V+  LAS  LL G+++++  TG+L+   
Sbjct: 133 YLGLELLTLSSYALVALRRDDVKATEAAMKYFVLGALASGFLLYGLSMVYGATGSLNLTE 192

Query: 178 -----AGWG----GRGALTAFGTALLLAGLAFKFSLVPFHMWTPDAFEAAPASAATLAGV 228
                AG G    G   +   G   ++AGLAFK  +VPFHMW PD +  AP +   + G 
Sbjct: 193 VMLTIAGGGDTLRGSPQVLTLGLVFVVAGLAFKLGVVPFHMWVPDVYHGAPTAITLMIGG 252

Query: 229 VSKSAVAIVILRLALTAHLPEPV-WSQGLAALGGASVLIGNLLALRQPQLPRMLGYSTIA 287
             K A   +++RL +    P  V W Q LA L   S+L+GNL A+ Q  L RML +STIA
Sbjct: 253 APKLAAFAIVIRLLVEGLQPMAVDWQQMLAVLAVMSLLVGNLAAIAQNNLKRMLAFSTIA 312

Query: 288 HSGYIALIIASGTPHAGEAV------------LFYLAIYAPAMLGALCVSAALGR----A 331
             G++ L + +G     + +            +FY+  Y    LG   V   L R    +
Sbjct: 313 QMGFMLLGLLAGVVQGADGLDTSNMANAYGSSMFYVVTYVLTTLGTFGVILLLSRSGFES 372

Query: 332 PTLPDLHGLMKRRPLEAIALSLSLLSLAGLPAAGGFIAKLFLLRVLIDGSLWVLVGIVVA 391
             + DL GL +R PL A  +++ + SLAG+P   GF AKL +L+ L+  S    VG+ V 
Sbjct: 373 DNINDLAGLNQRSPLYAGVMAVCMFSLAGVPPLVGFYAKLSVLQALLASSGAFYVGLAVF 432

Query: 392 G---SSLGFFYYAKFFTAPFVGHTHDESEPLPQLD-RGLLIVCIALIVIFGVAPAGLMNV 447
               S +G FYY +     +       ++    LD R +L +   L+++ G+ P GLM +
Sbjct: 433 AVVMSLIGAFYYLRVVKIMYFDAPTQTADIEAGLDARSVLSINGLLVLVLGIVPGGLMTL 492

Query: 448 VAATMA 453
            A  +A
Sbjct: 493 CAQAVA 498