Pairwise Alignments

Query, 454 a.a., proton-conducting transporter membrane subunit from Rhodopseudomonas palustris CGA009

Subject, 485 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  240 bits (613), Expect = 6e-68
 Identities = 176/485 (36%), Positives = 259/485 (53%), Gaps = 38/485 (7%)

Query: 1   MTAAQFAALSPLVVLAIAAVAAMMLVPLARLQIVQASAAAGLAIAAALVLLRIGAPAAPM 60
           +T     AL PL+++ +  V  M+ +   R   + A+ +  + + AALV L     A  M
Sbjct: 3   ITPQHLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSV-IGLNAALVSLWFVGQAGAM 61

Query: 61  GA--LFTDDGPARFGIVFACLVSLGALVFLRTGHPAKEAPS-------LLVLVA-IGAAT 110
               L   DG   F +++  LV L +L      +P  E  +       LLVL+A +G   
Sbjct: 62  DVTPLMRVDG---FAMLYTGLVLLASLATCTFAYPWLEGYNDNQEEFYLLVLIASLGGIL 118

Query: 111 LAGAGHAATLFLGIEILSLSLIAL--FAFRLTRQGLEAAYKFLVMSGLASSALLLGIALI 168
           LA A H A LFLGIE++SL L  L  +AFR  R  LEA+ K+ ++S  ASS LL G+AL+
Sbjct: 119 LANANHLAALFLGIELISLPLFGLIGYAFRQKRS-LEASIKYTILSAAASSFLLFGMALV 177

Query: 169 FAETGALDFAGWG---GRGAL----TAFGTALLLAGLAFKFSLVPFHMWTPDAFEAAPAS 221
           +A++G L F   G   G G L       G  L++ GL FK SLVPFH+WTPD ++ APA 
Sbjct: 178 YAQSGNLSFEALGKSLGDGMLHEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAP 237

Query: 222 AATLAGVVSKSAVAIVILRLALTAHLPEPVWSQG-LAALGGASVLIGNLLALRQPQLPRM 280
            +T     SK A+  V++RL L A + +    +  L  +  AS++ GNL+AL Q  + R+
Sbjct: 238 VSTFLATASKIAIFGVVMRLFLYAPVGDSEAVRVVLGIIAFASIIFGNLMALSQTNIKRL 297

Query: 281 LGYSTIAHSGY--IALIIASGTPHAGEAVLFYLAIYAPAMLGALCVSAALG---RAPTLP 335
           LGYS+I+H GY  +ALI       + EAV  YLA Y  + LGA  V + +    R P   
Sbjct: 298 LGYSSISHLGYLLVALIALQSGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPFRGPDAD 357

Query: 336 DLH---GLMKRRPLEAIALSLSLLSLAGLPAAGGFIAKLFLLRVLIDGSLWVLVGIVVAG 392
            L+   GL   RP+ A  +++ +LSLAG+P   GFI K ++L V +  SLW LV  VV G
Sbjct: 358 SLYSYRGLFWHRPVLAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQASLWWLVAAVVVG 417

Query: 393 SSLGFFYYAKFFTAPFVGHTHDESEPLP---QLDRGLLIVCIA--LIVIFGVAPAGLMNV 447
           S++G +YY +   + ++          P   Q   G ++V I+  L+++ GV P  L+++
Sbjct: 418 SAIGLYYYLRVAVSLYLHAPQQPGRDAPTNWQYSAGGIVVLISALLVLVLGVWPQPLISL 477

Query: 448 VAATM 452
           V   M
Sbjct: 478 VQLAM 482