Pairwise Alignments

Query, 386 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 399 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 98.2 bits (243), Expect = 4e-25
 Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 32/272 (11%)

Query: 5   LRIGFIPLVDAAALIVAADKGFCAAEGLDVE---LVREISWANVRDKFNIGLFDAAHLLA 61
           +RIG++P+ DA  L+VA + G   AEG+  E   L+R  SWA V + F  G  +  HLL+
Sbjct: 44  VRIGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLR--SWAQVIEAFISGQVNVIHLLS 101

Query: 62  PLAVASSLGIGHVKVPVISGFGLGVNGNAITVSPDLHAAIVAMADGDVADPLVSGRALAR 121
           P+ V +  G    KVP        V G+ +TV+P +   +  +    VA P     ++  
Sbjct: 102 PMTVWARYGS---KVPAKVVAWNHVGGSGLTVAPGI-TDVKQLGGKSVAIPF--WYSIHN 155

Query: 122 VVAER--RAKGQEPLTFGMTFPFSSHNYDLRFWMGAGGVDPDEDVRLVVLPPPFMVESLA 179
           VV ++  R  G  P+                    AG V    +V L+VLPP  M  +LA
Sbjct: 156 VVVQQLFRDNGLTPVA-----------------RAAGSVIAANEVNLIVLPPSDMPPALA 198

Query: 180 SKHLDGFCVGAPWNSVAIDLGIGTILHFTSELFQRAAEKMLTVRANWAAQHPEVLKALIR 239
           S+ +DG+ V  P+N++A +L +G +  FT ++++  A  ++ +  +  A  P+  + ++ 
Sbjct: 199 SQRIDGYIVAEPFNALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLANRPQWSQKVVN 258

Query: 240 AHARAADYIEDVANRDEVCALLTAPGRIEVAP 271
           A  +A  +  D  NR+E   LL+  G     P
Sbjct: 259 AIVKAQVWTRD--NREEAVKLLSKDGPNRYTP 288