Pairwise Alignments

Query, 386 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

 Score =  172 bits (435), Expect = 2e-47
 Identities = 128/377 (33%), Positives = 177/377 (46%), Gaps = 18/377 (4%)

Query: 5   LRIGFIPLVDAAALIVAADKGFCAAEGLDVELVREISWANVRDKFNIGLFDAAHLLAPLA 64
           L IG++ L D A+++VAA +GF    GL + L R+ SWA +RDK   G  DAAH L  L 
Sbjct: 24  LNIGYMALTDCASVVVAATQGFAQQHGLTLNLQRQGSWAGLRDKLVSGELDAAHCLYGLV 83

Query: 65  VASSLGIGHVKVPVISGF-GLGVNGNAITVSPDLHAAIVAMADGDVADPLVSGRALARVV 123
            A  LGIG V    ++   GL  N  AI +SP       A+    V +P     ALAR+V
Sbjct: 84  YAVHLGIGGVPASDMAVLMGLNQNAQAINLSP-------ALQRKGVTNP----EALARLV 132

Query: 124 AERRAKGQEPLTFGMTFPFSSHNYDLRFWMGAGGVDPDEDVRLVVLPPPFMVESLASKHL 183
            +  A+    LTF  TFP  +H   L +W+ + G+ P  DV  VV+PP  M   L +  +
Sbjct: 133 HQHGAR----LTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHLQAGRI 188

Query: 184 DGFCVGAPWNSVAIDLGIGTILHFTSELFQRAAEKMLTVRANWAAQHPEVLKALIRAHAR 243
           DGFCVG PW + A+  G G  L  +  ++    EK+L     +A Q+P   +ALI+A   
Sbjct: 189 DGFCVGEPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNSARALIKAILT 248

Query: 244 AADYIE-DVANRDEVCALLTAPGRIEVAPELIRRTLDGRLKVAADGTLRTSDRYLLVGRG 302
           A+ +IE    NR     LL+A   ++   + I   L G  +       +      L  +G
Sbjct: 249 ASRFIEQSPENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQDPHALRLFDQG 308

Query: 303 AAARPDPVQGAWNYAQMVRWGQAPLSADLLAAAKAVFRPDLY-DAAVGTAPALPSAPADG 361
            A  P    G W   Q  RWG      D L  A+ V +  LY +AA     A P  P   
Sbjct: 309 RANLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSLGIACPGQPMRS 368

Query: 362 IGECTGAPFDPDDIAGY 378
                G+ +D  D  GY
Sbjct: 369 SLLIDGSRWDGSDPFGY 385