Pairwise Alignments

Query, 386 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 437 a.a., Nitrate ABC transporter, nitrate-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  178 bits (452), Expect = 2e-49
 Identities = 119/376 (31%), Positives = 178/376 (47%), Gaps = 17/376 (4%)

Query: 5   LRIGFIPLVDAAALIVAADKGFCAAEGLDVELVREISWANVRDKFNIGLFDAAHLLAPLA 64
           ++IGFIPL D A++++AA+ G     G+ +   +E SWA VRDK      D AH+L  L 
Sbjct: 68  VKIGFIPLTDCASVVMAAELGIDKKYGVKIVPTKEASWAGVRDKLVNNELDMAHVLYGLI 127

Query: 65  VASSLGIGHVKVPVISGFGLGVNGNAITVSPDLHAAIVAMADGDVADPLVSGRALARVVA 124
               LG    K  +     L  NG AIT+S  L                V G +LA+++A
Sbjct: 128 YGLQLGTAGPKKDMAILMNLNQNGQAITLSKKL-----------AEKGAVDGPSLAKLMA 176

Query: 125 ERRAKGQEPLTFGMTFPFSSHNYDLRFWMGAGGVDPDEDVRLVVLPPPFMVESLASKHLD 184
             + +     TF  TFP  +H   L +W+ A G+DP +D R +V+PPP MV ++   ++D
Sbjct: 177 TEKRE----YTFAQTFPTGTHAMWLYYWLAAAGIDPFKDARAIVVPPPQMVANMRVGNMD 232

Query: 185 GFCVGAPWNSVAIDLGIGTILHFTSELFQRAAEKMLTVRANWAAQHPEVLKALIRAHARA 244
           GFCVG PWN  AI  GIG   + T ++++   EK+L   A +  ++P   +A+  A   A
Sbjct: 233 GFCVGEPWNHRAIMDGIGITANTTQDIWKDHPEKVLGTTAEFVQKNPNTARAVTAAILEA 292

Query: 245 ADYIE-DVANRDEVCALLTAPGRIEVAPELIRRTLDGRLKVAADGTLRTSDRYLLVGRGA 303
             +I+  + N++++   +     +    + I + + GR +     T    +       GA
Sbjct: 293 GKWIDAGLQNKNKMAETIAQRSYVNTGVDAINQRILGRYQNGLGKTWDDPNHMKFYNDGA 352

Query: 304 AARPDPVQGAWNYAQMVRWGQAPLSADLLAAAKAVFRPDLY-DAAVGTAPALPSAPADGI 362
           A  P    G W   Q  RWG      D LA AK V R D+Y +AA  T   LP +     
Sbjct: 353 ANYPYLSDGMWFLTQHKRWGLLKSHPDYLAVAKQVNRIDIYKEAASATKTPLPKSDLRSA 412

Query: 363 GECTGAPFDPDDIAGY 378
               G  +D  D A Y
Sbjct: 413 KFIDGVVWDGKDPAKY 428