Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1236 a.a., methionine synthase from Pseudomonas simiae WCS417

 Score = 1495 bits (3870), Expect = 0.0
 Identities = 747/1230 (60%), Positives = 937/1230 (76%), Gaps = 21/1230 (1%)

Query: 18   QRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQPQAIEDIHAQYLR 77
            +RIL+LDG MGTMIQ  +L+E  +RG+RF D+  D++GNNDLL++T+P  I  I   YL 
Sbjct: 17   ERILILDGGMGTMIQSYKLEENDYRGKRFADWPSDVKGNNDLLVITRPDVIGGIEKAYLD 76

Query: 78   AGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAA-AKVEAEDGKPRFVAGAI 136
            AGADI+ TNTF++T I+ ADY M  LA+E++ +GARLAR  A AK      KPRFVAG +
Sbjct: 77   AGADILETNTFNATRISMADYGMEALAFELNVEGARLARKIADAKTAETPDKPRFVAGVL 136

Query: 137  GPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLLETIFDTLNAKAAL 196
            GPT+RT S+SPDV NPGYR VTFD+L   Y+E   GL++GGAD++L+ETIFDTLNAKAA+
Sbjct: 137  GPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTLNAKAAI 196

Query: 197  YAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARPITIGFNCALGAKD 256
            +A+  + E   I++P+MISGTITD SGR LSGQ  EAFWNSV HA+PI++G NCALGA +
Sbjct: 197  FAVQGVFEELNIELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNCALGASE 256

Query: 257  LRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAEAGLVNIVGGCCGT 316
            LR ++ ++S  A+T V A+PNAGLPNEFG+YDE P   A ++ EFA++G +NIVGGCCGT
Sbjct: 257  LRPYLEELSNKANTHVSAHPNAGLPNEFGEYDELPSQTAKVIEEFAQSGFLNIVGGCCGT 316

Query: 317  TPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVGERTNVTGSAKFRK 376
            TP HI+AIA+AVA + PR IP I    RLSGLEPF + +   FVNVGERTN+TGSAKF +
Sbjct: 317  TPGHIEAIAKAVAGYAPRQIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNITGSAKFAR 376

Query: 377  LITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLVAAEPDIAKVPVMV 436
            LI   +Y  AL+VA  QVE GAQ+ID+NMDEG+LDS+ AM+TFLNL+A EPDI++VP+M+
Sbjct: 377  LIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPIMI 436

Query: 437  DSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAVVVMAFDETGQADT 496
            DSSK++VIEAGLKC+QGK +VNSIS+KEG ++F+H A++ +R+GAAVVVMAFDE GQADT
Sbjct: 437  DSSKWDVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAFDEAGQADT 496

Query: 497  YARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGVDFIEATRWIRQNL 556
             ARK EIC R+YDILVN VGFPPEDIIFDPNIFA+ATG+EEHNNY VDFI A  +IR  L
Sbjct: 497  EARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACAYIRDEL 556

Query: 557  PHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAGQMIVYDDIDPELR 616
            P+A  SGGVSN+SFSFRGN PVREA+HSVFL +AI+ G+ MGIVNAGQ+ +YD I  ELR
Sbjct: 557  PYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIVNAGQLEIYDQIPAELR 616

Query: 617  QVCEDVILNRDPGASERLLALADKYRGQGKQQKEQDLAWRSWPVEQRLSHALVHGITEFI 676
               EDV+LNR P  ++ LLA+ADKY+G G  ++ +   WR W V +RL HALV GIT  I
Sbjct: 617  DAVEDVVLNRTPDGTDALLAIADKYKGDGSVKEAETEEWRGWDVNKRLEHALVKGITTHI 676

Query: 677  ELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVKSARVMKQAVAYLMPF 736
              DTEE+R    RP+ VIEGPLM+GMN+VGDLFG GKMFLPQVVKSARVMKQAVA+L+PF
Sbjct: 677  VEDTEESRLSFARPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVVKSARVMKQAVAHLIPF 736

Query: 737  MEEEKARNLAAGTDTGERATA-GKIVLATVKGDVHDIGKNIVGIVLQCNNFEVIDLGVMV 795
            +E EK          G++  A GKI++ATVKGDVHDIGKNIVG+VL CN ++++DLGVMV
Sbjct: 737  IELEK----------GDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMV 786

Query: 796  PAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPLLIGGATTSRVHTAV 855
            PA KI++ AK +  DI+GLSGLITPSLDEM  +A E+QR  F++PL+IGGATTS+ HTAV
Sbjct: 787  PAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAV 846

Query: 856  KIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADYAKISAAHHRAQADKKR 915
            KI+P Y + +VV+V DASRAVGVA+ LLSK+  A +    R +Y ++        A  +R
Sbjct: 847  KIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVERTREEYVEVRERTSNRSARTER 906

Query: 916  LTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYIDWTPFFQAWELAGRFPA 975
            L+  AA A   + DW+  SPV P+F G +      L  LAEYIDWTPFF +W+LAG+FP 
Sbjct: 907  LSYPAAIAKKPQFDWSTYSPVVPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDLAGKFPR 966

Query: 976  ILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPAN-ADGDDILVYADETRTT 1034
            IL D VVGEAA +LYADA++ML +++ E   +A+A  GFWP N    DD+ VY D+ +  
Sbjct: 967  ILTDEVVGEAATALYADAQEMLKKLIDEKLISARAVFGFWPTNQVQDDDLEVYGDDGQ-- 1024

Query: 1035 PIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVTAGIGEDVIADKFKAER 1094
            PIA LH LRQQ+ K +G+ N +L+DF+AP  S V DYIGGF+ TAGIG + +A  ++   
Sbjct: 1025 PIAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYIGGFITTAGIGAEEVAKAYQDAG 1084

Query: 1095 DDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAEDLILEKYQGIRPAPGYP 1154
            DDY+SIMVKALADRLAEA AE +H +VR+E WGYA DE L  E LI E+Y GIRPAPGYP
Sbjct: 1085 DDYNSIMVKALADRLAEACAEWLHQQVRKEHWGYAKDEQLDNEALIKEQYSGIRPAPGYP 1144

Query: 1155 AQPDHTEKATLFELLDAEA------SAGVTLTESFAMWPGSSVSGLYFSHPQSAYFGVGK 1208
            A PDHTEKA LF+LLD EA       +GV LTE +AM+P ++VSG YF+HPQ+ YF VGK
Sbjct: 1145 ACPDHTEKAQLFQLLDPEAREMHAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGK 1204

Query: 1209 IERDQVEDYAARKGWDVATAERWLAPVLNY 1238
            +++DQV  Y ARKG D++  ERWLAP L Y
Sbjct: 1205 VDKDQVASYTARKGQDLSVTERWLAPNLGY 1234