Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

 Score = 1514 bits (3920), Expect = 0.0
 Identities = 760/1241 (61%), Positives = 950/1241 (76%), Gaps = 20/1241 (1%)

Query: 6    SAKRTQLLALAAQRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQP 65
            SA+   L     +RIL+LDG MGTMIQ  +L+E  +RG RF D+  D++GNNDLL+L++P
Sbjct: 5    SARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRP 64

Query: 66   QAIEDIHAQYLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAA-AKVEA 124
              I  I   YL AGADI+ TNTF++T I+QADY M  L YE++ +GAR+AR  A AK   
Sbjct: 65   DVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADAKTLE 124

Query: 125  EDGKPRFVAGAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLLE 184
               KPRFVAG +GPT+RT SISPDV +PG+R VTFD+L   Y E   GL++GGAD++L+E
Sbjct: 125  TPDKPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADLILIE 184

Query: 185  TIFDTLNAKAALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARPI 244
            TIFDTLNAKAA++A+ ++ E   +++P+MISGTITD SGR LSGQ  EAFWNSVRHA+PI
Sbjct: 185  TIFDTLNAKAAIFAVQQVFEDDNVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPI 244

Query: 245  TIGFNCALGAKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAEA 304
            ++G NCALGAKDLR ++ +++  ADT V A+PNAGLPN FG+YDE+P  MA++V EFA +
Sbjct: 245  SVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEEFAAS 304

Query: 305  GLVNIVGGCCGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVGE 364
            G +NI+GGCCGTTP HI+AIAEAVA +KPR IP I    RLSGLEPF + +   FVNVGE
Sbjct: 305  GFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFVNVGE 364

Query: 365  RTNVTGSAKFRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLVA 424
            RTN+TGSAKF +LI   +Y  AL+VA  QVE GAQ+ID+NMDEG+LDS+AAM+ FLNL+A
Sbjct: 365  RTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFLNLIA 424

Query: 425  AEPDIAKVPVMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAVV 484
             EPDI++VP+M+DSSK+ VIEAGLKC+QGK +VNSIS+KEG ++F H AR+ +R+GAAVV
Sbjct: 425  GEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYGAAVV 484

Query: 485  VMAFDETGQADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGVD 544
            VMAFDE GQADT ARK EIC R+YDILVN VGFPPEDIIFDPNIFA+ATG+EEHNNY VD
Sbjct: 485  VMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVD 544

Query: 545  FIEATRWIRQNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAGQ 604
            FIEA  +IR +LPHA  SGGVSN+SFSFRGN PVREA+HSVFLYHAI+ G+ MGIVNAGQ
Sbjct: 545  FIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIVNAGQ 604

Query: 605  MIVYDDIDPELRQVCEDVILNRDPGASERLLALADKYRGQGKQQKEQDLAWRSWPVEQRL 664
            + +YD+I  +LR+  EDV+LNR P  ++ LLA+AD Y+G G  ++ ++  WRS PVE+RL
Sbjct: 605  LEIYDEIPAQLREKVEDVVLNRTPHGTDALLAIADDYKGGGATKEVENEEWRSLPVEKRL 664

Query: 665  SHALVHGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVKSAR 724
             HALV GIT FI  DTE  R +  RP+ VIEGPLM GMNVVGDLFG GKMFLPQVVKSAR
Sbjct: 665  EHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVVKSAR 724

Query: 725  VMKQAVAYLMPFMEEEKARNLAAGTDTGERATA-GKIVLATVKGDVHDIGKNIVGIVLQC 783
            VMKQAVA+L+PF+E EK          G++  A GKI++ATVKGDVHDIGKNIVG+VL C
Sbjct: 725  VMKQAVAHLIPFIEAEK----------GDKPEAKGKILMATVKGDVHDIGKNIVGVVLGC 774

Query: 784  NNFEVIDLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPLLI 843
            N ++++DLGVMVPA KI++TA+ +  DI+GLSGLITPSLDEM  +A E+QR GF +PL+I
Sbjct: 775  NGYDIVDLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLMI 834

Query: 844  GGATTSRVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADYAKIS 903
            GGATTS+ HTAVKI+P Y + +V++V DASRAVGVA+ LLSK+    +  + R +Y  + 
Sbjct: 835  GGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDVR 894

Query: 904  AAHHRAQADKKRLTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYIDWTPF 963
                   A  +RL+ A A A   + DWA   P  PSF G +      L  LAEYIDWTPF
Sbjct: 895  ERTANRSARTERLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTPF 954

Query: 964  FQAWELAGRFPAILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPAN-ADGD 1022
            F +W+LAG+FP IL D VVGEAA +LY DAR+MLD+++ E   +A+A  GFWPAN  D D
Sbjct: 955  FISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDDD 1014

Query: 1023 DILVYADETRTTPIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVTAGIG 1082
            DI VY ++ +   +ATLH LRQQ  K +G+ N +L+DF+AP  S V DY+GGF+ TAGIG
Sbjct: 1015 DIEVYGEDGQA--LATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIG 1072

Query: 1083 EDVIADKFKAERDDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAEDLILE 1142
             + +A  ++ + DDYSSIMVKALADRLAEA AE +H +VR+E WGYA DE+L  E LI E
Sbjct: 1073 AEEVAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKE 1132

Query: 1143 KYQGIRPAPGYPAQPDHTEKATLFELLDAEA-----SAGVTLTESFAMWPGSSVSGLYFS 1197
            +Y GIRPAPGYPA PDHTEK TLF LLD  A      +GV LTE FAM+P ++VSG YF+
Sbjct: 1133 QYSGIRPAPGYPACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYFA 1192

Query: 1198 HPQSAYFGVGKIERDQVEDYAARKGWDVATAERWLAPVLNY 1238
            HPQ+ YF VGK+++DQ+E Y+ARKG D++ +ERWLAP L Y
Sbjct: 1193 HPQAKYFAVGKVDKDQIERYSARKGQDISVSERWLAPNLGY 1233