Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1227 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1475 bits (3819), Expect = 0.0
 Identities = 752/1237 (60%), Positives = 921/1237 (74%), Gaps = 16/1237 (1%)

Query: 5    ISAKRTQLLALAAQRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQ 64
            +S+K  QL A   +RILVLDG MGTMIQ  +L E  FRGERF D+  DL+GNNDLL+L++
Sbjct: 1    VSSKVEQLRAQLNERILVLDGGMGTMIQSYRLHEEDFRGERFADWPCDLKGNNDLLVLSK 60

Query: 65   PQAIEDIHAQYLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAAAKVEA 124
            P+ I  IH  Y  AGADI+ TNTF+ST+IA ADY M  L+ E++   A+LAR  A +  A
Sbjct: 61   PEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYRMESLSAEINYAAAKLARACADEWTA 120

Query: 125  EDG-KPRFVAGAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLL 183
                KPRFVAG +GPTNRTASISPDV +P +R +TFD L  AY E    L++GGAD++L+
Sbjct: 121  RTPEKPRFVAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGADLILI 180

Query: 184  ETIFDTLNAKAALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARP 243
            ET+FDTLNAKAA++A+ E  EA G+D+P+MISGTITD SGR LSGQ  EAF+NS+RHA  
Sbjct: 181  ETVFDTLNAKAAVFAVKEEFEALGVDLPIMISGTITDASGRTLSGQTTEAFYNSLRHAEA 240

Query: 244  ITIGFNCALGAKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAE 303
            +T G NCALG  +LR ++ ++SR+A+  V A+PNAGLPN FG+YD   + MA  + E+AE
Sbjct: 241  LTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAE 300

Query: 304  AGLVNIVGGCCGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVG 363
            AG +NIVGGCCGTTP HI A++ AVA   PR +P I    RLSGLEP  +  D  FVNVG
Sbjct: 301  AGFLNIVGGCCGTTPEHIAAMSRAVAGLLPRQLPDIPVACRLSGLEPLNIGDDSLFVNVG 360

Query: 364  ERTNVTGSAKFRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLV 423
            ERTNVTGSAKF++LI    Y+ AL VAR QVE+GAQIID+NMDEG+LD+EAAM+ FL+L+
Sbjct: 361  ERTNVTGSAKFKRLIKEEKYSEALDVARQQVESGAQIIDINMDEGMLDAEAAMVRFLSLI 420

Query: 424  AAEPDIAKVPVMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAV 483
            A EPDIA+VP+M+DSSK+ VIE GLKC+QGK +VNSIS+KEG + F+H A++ RR+GAAV
Sbjct: 421  AGEPDIARVPIMIDSSKWEVIEKGLKCIQGKGIVNSISMKEGVEAFIHHAKLLRRYGAAV 480

Query: 484  VVMAFDETGQADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGV 543
            VVMAFDE GQADT ARK EIC RAY IL   VGFPPEDIIFDPNIFA+ATG+EEHNNY  
Sbjct: 481  VVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQ 540

Query: 544  DFIEATRWIRQNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAG 603
            DFI A   I++ LPHA ISGGVSN+SFSFRGN+PVREA+H+VFLY+AI+ GMDMGIVNAG
Sbjct: 541  DFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG 600

Query: 604  QMIVYDDIDPELRQVCEDVILNRDPGASERLLALADKYRGQGKQQ--KEQDLAWRSWPVE 661
            Q+ +YDD+  ELR   EDVILNR    +ERLL LA+KYRG    +    Q   WRSW V+
Sbjct: 601  QLAIYDDLPAELRDAVEDVILNRRDDGTERLLDLAEKYRGSKTDEAANAQQAEWRSWDVK 660

Query: 662  QRLSHALVHGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVK 721
            +RL ++LV GITEFIE DTEEAR +A RP+ VIEGPLM GMNVVGDLFG+GKMFLPQVVK
Sbjct: 661  KRLEYSLVKGITEFIEQDTEEARQQAARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK 720

Query: 722  SARVMKQAVAYLMPFMEEEKARNLAAGTDTGERATAGKIVLATVKGDVHDIGKNIVGIVL 781
            SARVMKQAVAYL PF+E  K +           ++ GK+V+ATVKGDVHDIGKNIVG+VL
Sbjct: 721  SARVMKQAVAYLEPFIEASKEKG----------SSNGKMVIATVKGDVHDIGKNIVGVVL 770

Query: 782  QCNNFEVIDLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPL 841
            QCNN+E++DLGVMVPA KI+ TA+  NAD++GLSGLITPSLDEM  +A E++R GF IPL
Sbjct: 771  QCNNYEIVDLGVMVPAEKILRTAREVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPL 830

Query: 842  LIGGATTSRVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADYAK 901
            LIGGATTS+ HTAVKI+  Y SG  V+V +ASR VGV ++LLS  +   + A  R +Y  
Sbjct: 831  LIGGATTSKAHTAVKIEQNY-SGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYET 889

Query: 902  ISAAHHRAQADKKRLTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYIDWT 961
            +   H R +     +TL AAR N    DW   +P     +G +     S+  L  YIDWT
Sbjct: 890  VRIQHARKKPRTPPVTLEAARDNDLAFDWERYTPPVAHRLGVQEVEA-SIETLRNYIDWT 948

Query: 962  PFFQAWELAGRFPAILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPANADG 1021
            PFF  W LAG++P IL+D VVG  A+ L+ DA  MLD++  E     +  +G +PAN  G
Sbjct: 949  PFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKLLNPRGVVGLFPANRVG 1008

Query: 1022 DDILVYADETRTTPIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVTAGI 1081
            DDI +Y DETRT  +   H LRQQ +K  G AN  L+DF+AP  S  ADYIG F VT G+
Sbjct: 1009 DDIEIYRDETRTHVLTVSHHLRQQTEK-VGFANYCLADFVAPKLSGKADYIGAFAVTGGL 1067

Query: 1082 GEDVIADKFKAERDDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAEDLIL 1141
             ED +AD F+A+ DDY+ IMVKA+ADRLAEAFAE +H RVR+ +WGYA +E+LS ++LI 
Sbjct: 1068 EEDALADAFEAQHDDYNKIMVKAIADRLAEAFAEYLHERVRKVYWGYAPNESLSNDELIR 1127

Query: 1142 EKYQGIRPAPGYPAQPDHTEKATLFELLDAEASAGVTLTESFAMWPGSSVSGLYFSHPQS 1201
            E YQGIRPAPGYPA P+HTEK T+++LLD E   G+ LTESFAMWPG+SVSG YFSHP+S
Sbjct: 1128 ENYQGIRPAPGYPACPEHTEKGTIWQLLDVEKHTGMKLTESFAMWPGASVSGWYFSHPES 1187

Query: 1202 AYFGVGKIERDQVEDYAARKGWDVATAERWLAPVLNY 1238
             YF V +I+RDQV DYA RKG  V   ERWLAP L Y
Sbjct: 1188 KYFAVAQIQRDQVTDYAFRKGMSVEDVERWLAPNLGY 1224