Pairwise Alignments

Query, 1293 a.a., methionine synthase from Rhodopseudomonas palustris CGA009

Subject, 1227 a.a., homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent from Escherichia coli BL21

 Score = 1483 bits (3840), Expect = 0.0
 Identities = 758/1237 (61%), Positives = 923/1237 (74%), Gaps = 16/1237 (1%)

Query: 5    ISAKRTQLLALAAQRILVLDGAMGTMIQQLQLDEAAFRGERFKDFHRDLRGNNDLLILTQ 64
            +S+K  QL A   +RILVLDG MGTMIQ  +L+EA FRGERF D+  DL+GNNDLL+L++
Sbjct: 1    MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSK 60

Query: 65   PQAIEDIHAQYLRAGADIVATNTFSSTSIAQADYEMSELAYEMSRDGARLARNAAAKVEA 124
            P+ I  IH  Y  AGADI+ TNTF+ST+IA ADY+M  L+ E++   A+LAR  A +  A
Sbjct: 61   PEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTA 120

Query: 125  EDG-KPRFVAGAIGPTNRTASISPDVANPGYRAVTFDDLRIAYSEQINGLLDGGADILLL 183
                KPR+VAG +GPTNRTASISPDV +P +R +TFD L  AY E    L++GGAD++L+
Sbjct: 121  RTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILI 180

Query: 184  ETIFDTLNAKAALYAIAEITEARGIDVPVMISGTITDKSGRLLSGQMPEAFWNSVRHARP 243
            ET+FDTLNAKAA++A+    EA G+++P+MISGTITD SGR LSGQ  EAF+NS+RHA  
Sbjct: 181  ETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEA 240

Query: 244  ITIGFNCALGAKDLRAHIADISRVADTLVCAYPNAGLPNEFGQYDESPEYMASLVGEFAE 303
            ++ G NCALG  +LR ++ ++SR+A+  V A+PNAGLPN FG+YD   + MA  + E+A+
Sbjct: 241  LSFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAQ 300

Query: 304  AGLVNIVGGCCGTTPAHIKAIAEAVAPHKPRVIPTIDPRLRLSGLEPFELTKDIPFVNVG 363
            AG +NIVGGCCGTTP HI A++ AV    PR +P I    RLSGLEP  + +D  FVNVG
Sbjct: 301  AGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVG 360

Query: 364  ERTNVTGSAKFRKLITAGDYAAALQVARDQVENGAQIIDVNMDEGLLDSEAAMITFLNLV 423
            ERTNVTGSAKF++LI    Y+ AL VAR QVENGAQIID+NMDEG+LD+EAAM+ FLNL+
Sbjct: 361  ERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLI 420

Query: 424  AAEPDIAKVPVMVDSSKFNVIEAGLKCLQGKPVVNSISLKEGEDKFLHEARIARRHGAAV 483
            A EPDIA+VP+M+DSSK++VIE GLKC+QGK +VNSIS+KEG D F+H A++ RR+GAAV
Sbjct: 421  AGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAV 480

Query: 484  VVMAFDETGQADTYARKTEICARAYDILVNRVGFPPEDIIFDPNIFAIATGLEEHNNYGV 543
            VVMAFDE GQADT ARK EIC RAY IL   VGFPPEDIIFDPNIFA+ATG+EEHNNY  
Sbjct: 481  VVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQ 540

Query: 544  DFIEATRWIRQNLPHAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIVNAG 603
            DFI A   I++ LPHA ISGGVSN+SFSFRGN+PVREA+H+VFLY+AI+ GMDMGIVNAG
Sbjct: 541  DFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG 600

Query: 604  QMIVYDDIDPELRQVCEDVILNRDPGASERLLALADKYRGQGKQQ--KEQDLAWRSWPVE 661
            Q+ +YDD+  ELR   EDVILNR    +ERLL LA+KYRG         Q   WRSW V 
Sbjct: 601  QLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVN 660

Query: 662  QRLSHALVHGITEFIELDTEEARAKAERPLHVIEGPLMAGMNVVGDLFGDGKMFLPQVVK 721
            +RL ++LV GITEFIE DTEEAR +A RP+ VIEGPLM GMNVVGDLFG+GKMFLPQVVK
Sbjct: 661  KRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK 720

Query: 722  SARVMKQAVAYLMPFMEEEKARNLAAGTDTGERATAGKIVLATVKGDVHDIGKNIVGIVL 781
            SARVMKQAVAYL PF+E  K +            T GK+V+ATVKGDVHDIGKNIVG+VL
Sbjct: 721  SARVMKQAVAYLEPFIEASKEQG----------KTNGKMVIATVKGDVHDIGKNIVGVVL 770

Query: 782  QCNNFEVIDLGVMVPAAKIIETAKAENADIVGLSGLITPSLDEMSFLAGELQRSGFNIPL 841
            QCNN+E++DLGVMVPA KI+ TAK  NAD++GLSGLITPSLDEM  +A E++R GF IPL
Sbjct: 771  QCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPL 830

Query: 842  LIGGATTSRVHTAVKIDPAYPSGSVVHVNDASRAVGVASSLLSKDRGAAYAAEVRADYAK 901
            LIGGATTS+ HTAVKI+  Y SG  V+V +ASR VGV ++LLS  +   + A  R +Y  
Sbjct: 831  LIGGATTSKAHTAVKIEQNY-SGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYET 889

Query: 902  ISAAHHRAQADKKRLTLAAARANATKIDWAATSPVKPSFIGTRSFSGYSLAELAEYIDWT 961
            +   H R +     +TL AAR N    DW A +P     +G +     S+  L  YIDWT
Sbjct: 890  VRIQHGRKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEA-SIETLRNYIDWT 948

Query: 962  PFFQAWELAGRFPAILDDSVVGEAARSLYADARKMLDRIVTENWFTAKATIGFWPANADG 1021
            PFF  W LAG++P IL+D VVG  A+ L+ DA  MLD++  E     +  +G +PAN  G
Sbjct: 949  PFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVG 1008

Query: 1022 DDILVYADETRTTPIATLHTLRQQLDKREGRANAALSDFIAPVASSVADYIGGFVVTAGI 1081
            DDI +Y DETRT  I   H LRQQ +K  G AN  L+DF+AP  S  ADYIG F VT G+
Sbjct: 1009 DDIEIYRDETRTHVINVSHHLRQQTEK-TGFANYCLADFVAPKLSGKADYIGAFAVTGGL 1067

Query: 1082 GEDVIADKFKAERDDYSSIMVKALADRLAEAFAERMHARVRREFWGYAADENLSAEDLIL 1141
             ED +AD F+A+ DDY+ IMVKALADRLAEAFAE +H RVR+ +WGYA +ENLS E+LI 
Sbjct: 1068 EEDALADAFEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIR 1127

Query: 1142 EKYQGIRPAPGYPAQPDHTEKATLFELLDAEASAGVTLTESFAMWPGSSVSGLYFSHPQS 1201
            E YQGIRPAPGYPA P+HTEKAT++ELL+ E   G+ LTESFAMWPG+SVSG YFSHP S
Sbjct: 1128 ENYQGIRPAPGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDS 1187

Query: 1202 AYFGVGKIERDQVEDYAARKGWDVATAERWLAPVLNY 1238
             Y+ V +I+RDQVEDYA RKG  V   ERWLAP L Y
Sbjct: 1188 KYYAVAQIQRDQVEDYARRKGMSVTEVERWLAPNLGY 1224